RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 NEMP2A6NFY4 417 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 SIGLEC6O43699 453 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 NUAK1O60285 661 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 CBFA2T3O75081 653 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 BANF1O75531 89 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 CSRP1P21291 193 aaKnown RBP17.29■□□□□ 0.36
SHMT2-225ENST00000556798 PSMA3P25788 255 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 AK4P27144 223 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-225ENST00000556798 AKT1P31749 480 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 MAGEA3P43357 314 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 ID4P47928 161 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 NOVA1P51513 510 aaKnown RBP17.29■□□□□ 0.36
SHMT2-225ENST00000556798 ACVR1Q04771 509 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 MORF4L2Q15014 288 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 ELOCQ15369 112 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 PLA2G4EQ3MJ16 856 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 PYCR3Q53H96 274 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 LDLRAP1Q5SW96 308 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 PSAPL1Q6NUJ1 521 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 FSTL5Q8N475 847 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-225ENST00000556798 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-225ENST00000556798 MFSD3Q96ES6 412 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 KIFC1Q9BW19 673 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 SLC32A1Q9H598 525 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 TREX1Q9NSU2 369 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 NLGN3Q9NZ94 848 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 RIMKLBQ9ULI2 386 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 SOX13Q9UN79 622 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 DOLKQ9UPQ8 538 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 ST14Q9Y5Y6 855 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
SHMT2-225ENST00000556798 LMO7DNF2Z398 122 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 YY2O15391 372 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 GRID2O43424 1007 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 CDK14O94921 469 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 GOT2P00505 430 aaKnown RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 ANXA6P08133 673 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 MYF5P13349 255 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 FOXN2P32314 431 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 PRAMEP78395 509 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 CACNG1Q06432 222 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TMEM115Q12893 351 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 GTF2H3Q13889 308 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 PUM1Q14671 1186 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 FNBP1LQ5T0N5 605 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 HIBCHQ6NVY1 386 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 C8orf74Q6P047 294 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 DET1Q7L5Y6 550 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TAF8Q7Z7C8 310 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 GKN2Q86XP6 184 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 PNPLA1Q8N8W4 532 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 OR6P1Q8NGX9 317 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 ERP44Q9BS26 406 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 RMI1Q9H9A7 625 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 MRM3Q9HC36 420 aaKnown RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 TRNAU1APQ9NX07 287 aaKnown RBP17.28■□□□□ 0.36
SHMT2-225ENST00000556798 SAMD15Q9P1V8 674 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
SHMT2-225ENST00000556798 SPAARA0A1B0GVQ0 90 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 SDR42E2A6NKP2 422 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 AGAP14A8MT82 685 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 TP73O15350 636 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 VEGFDO43915 354 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 KCNK5O95279 499 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ALPPL2P10696 532 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ACP5P13686 325 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 MSH3P20585 1137 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 CTSCP53634 463 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 CTBSQ01459 385 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 DHX9Q08211 1270 aaKnown RBP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ILF3Q12906 894 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 MSS51Q4VC12 460 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 SLC30A9Q6PML9 568 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 SERPINA9Q86WD7 417 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 NRROSQ86YC3 692 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 TRAPPC5Q8IUR0 188 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 RASGEF1AQ8N9B8 481 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 NOA1Q8NC60 698 aaKnown RBP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 MNS1Q8NEH6 495 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 GPBAR1Q8TDU6 330 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 PEX13Q92968 403 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ZNF669Q96BR6 464 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 CNDP2Q96KP4 475 aaKnown RBP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 SIGLEC10Q96LC7 697 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 TTC25Q96NG3 672 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 GSDMCQ9BYG8 508 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ZCCHC2Q9C0B9 1178 aaKnown RBP17.27■□□□□ 0.36
SHMT2-225ENST00000556798 SIRPGQ9P1W8 387 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 ANAPC5Q9UJX4 755 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 MAD1L1Q9Y6D9 718 aa17.27■□□□□ 0.36
SHMT2-225ENST00000556798 TRBV5-4A0A0C4DH59 114 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms