RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 FGF1P05230 155 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ITGA2BP08514 1039 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 GPR89BP0CG08 455 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF75DP51815 510 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KIF5AQ12840 1032 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CBLBQ13191 982 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 GALNT3Q14435 633 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PTPRRQ15256 657 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 LLGL1Q15334 1064 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SLC14A2Q15849 920 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PHF19Q5T6S3 580 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PDPK2PQ6A1A2 396 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 C11orf63Q6NUN7 778 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CHST15Q7LFX5 561 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KIAA1328Q86T90 577 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PHYKPLQ8IUZ5 450 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SYCE1Q8N0S2 351 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PELI3Q8N2H9 469 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 AVL9Q8NBF6 648 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CCL4L1Q8NHW4 92 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 HTR3CQ8WXA8 447 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SH3KBP1Q96B97 665 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SLC38A3Q99624 504 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 DPYSL5Q9BPU6 564 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 FSD1LQ9BXM9 530 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 FOXP3Q9BZS1 431 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TRABDQ9H4I3 376 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SPATS2LQ9NUQ6 558 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.27□□□□□ -1.255e-7■■■□□ 17.9
SCFD1-222ENST00000556768 SAE1Q9UBE0 346 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 RALYQ9UKM9 306 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SHOC2Q9UQ13 582 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 RNF215Q9Y6U7 377 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 A0A0U1RQS6 177 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 GOLGA6L9A6NEM1 432 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 OR5K4A6NMS3 321 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 H7C0C1 242 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 MEN1O00255 615 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 TLX3O43711 291 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 TJP3O95049 919 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 MT-CYBP00156 380 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ATP1A1P05023 1023 aaKnown RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 MMP2P08253 660 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 VCLP18206 1134 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 AK4P27144 223 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ITPKBP27987 946 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 CCKBRP32239 447 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ATP5OP48047 213 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 RWDD2BP57060 319 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 TMPRSS3P57727 454 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 XRCC4Q13426 336 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 PRPSAP1Q14558 356 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 PPP2R5EQ16537 467 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 HIF1AQ16665 826 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 PYCR3Q53H96 274 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF569Q5MCW4 686 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 HENMT1Q5T8I9 393 aaKnown RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 KCTD16Q68DU8 428 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ITPRIPL1Q6GPH6 555 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 LYSMD3Q7Z3D4 306 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 GPR155Q7Z3F1 870 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 SPRED1Q7Z699 444 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 TRIM74Q86UV6 250 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 JAMLQ86YT9 394 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 SPACA3Q8IXA5 215 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 UBL4BQ8N7F7 174 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 CCDC112Q8NEF3 446 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 SPATA22Q8NHS9 363 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 GDAP1Q8TB36 358 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 FCRL3Q96P31 734 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 PPP1R2P1Q96PQ5 205 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 BAG1Q99933 345 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 HEMGNQ9BXL5 484 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 CARD9Q9H257 536 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 TRIM39Q9HCM9 518 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 HACD3Q9P035 362 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 PKP3Q9Y446 797 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ARID1BQ8NFD5 2236 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-222ENST00000556768 ATRXP46100 2492 aa7.26□□□□□ -1.25
SCFD1-222ENST00000556768 CHD5Q8TDI0 1954 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 hCG_1818297A0A087WSY0 165 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 A0A1W2PQM1 296 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 APOC4-APOC2K7ER74 178 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 GRID2O43424 1007 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 PPFIA2O75334 1257 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 ANXA9O76027 345 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 SOD1P00441 154 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 APOC2P02655 101 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 FUCA1P04066 466 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 PTPN3P26045 913 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 CSTF2P33240 577 aaKnown RBP eCLIP7.25□□□□□ -1.256e-6■■□□□ 13.8
SCFD1-222ENST00000556768 HMGCLP35914 325 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 OR1D5P58170 312 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 DCDC1P59894 354 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 CXADRP78310 365 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 GPLD1P80108 840 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms