RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 HADHAP40939 763 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ALDH7A1P49419 539 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 METAP2P50579 478 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MC1RQ01726 317 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 CREB5Q02930 508 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 TCP10Q12799 353 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 GRIK3Q13003 919 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 CHAF1BQ13112 559 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 OLIG2Q13516 323 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 FGFBP1Q14512 234 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 LPIN1Q14693 890 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 DRAP1Q14919 205 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 HSPB2Q16082 182 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 SMN1Q16637 294 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 TCTN1Q2MV58 587 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ZSCAN23Q3MJ62 389 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 PXDC1Q5TGL8 231 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ZNF626Q68DY1 528 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 CTR9Q6PD62 1173 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 SYCE2Q6PIF2 218 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 SARM1Q6SZW1 724 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 TRAPPC11Q7Z392 1133 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 IQCA1Q86XH1 822 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 DENND6AQ8IWF6 608 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ARHGAP12Q8IWW6 846 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MB21D2Q8IYB1 491 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ZNF444Q8N0Y2 327 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 NME8Q8N427 588 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 NANOGP1Q8N7R0 232 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 C1orf131Q8NDD1 294 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MSI2Q96DH6 328 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MMABQ96EY8 250 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 RSRC1Q96IZ7 334 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ZNF570Q96NI8 536 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 WDFY2Q96P53 400 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 WDR77Q9BQA1 342 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ANP32EQ9BTT0 268 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 STRA6Q9BX79 667 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 POLDIP3Q9BY77 421 aaKnown RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 SCPEP1Q9HB40 452 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 ANKRD10Q9NXR5 420 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 TUBA8Q9NY65 449 aaPredicted RBP4.3□□□□□ -1.72
TRAV15-201ENST00000556680 MTMR6Q9Y217 621 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 KIF3AQ9Y496 699 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
TRAV15-201ENST00000556680 SNED1Q8TER0 1413 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 WDR19Q8NEZ3 1342 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PLXNA1Q9UIW2 1896 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 GPR75-ASB3A0A0A6YYF3 556 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 A0A0G2JK05 382 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 TMEM272A0A1B0GTI8 110 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 FAM237AA0A1B0GTK4 181 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 A0A1W2PRG0 241 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 hCG_1807616A0A1W2PRN6 198 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 CLRN2A0PK11 232 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 YDJCA8MPS7 323 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 IFNL4K9M1U5 179 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PSMD14O00487 310 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 STX6O43752 255 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 JAK2O60674 1132 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PFKFB2O60825 505 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 RGS11O94810 467 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 NDUFB8O95169 186 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 IFNA2P01563 188 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 FGBP02675 491 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 KLKB1P03952 638 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 HOXB5P09067 269 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 CLTBP09497 229 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 ETFAP13804 333 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 CHRNB2P17787 502 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 ME1P48163 572 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PPP3CCP48454 512 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 CXCR3P49682 368 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 FKBP1AP62942 108 aaKnown RBP4.29□□□□□ -1.72
TRAV15-201ENST00000556680 AKAP17AQ02040 695 aaKnown RBP4.29□□□□□ -1.72
TRAV15-201ENST00000556680 CEBPZQ03701 1054 aaKnown RBP4.29□□□□□ -1.72
TRAV15-201ENST00000556680 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 TRIM29Q14134 588 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 TNIP1Q15025 636 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
TRAV15-201ENST00000556680 SOWAHAQ2M3V2 549 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 COL28A1Q2UY09 1125 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 Q5PR19 223 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 WASHC2DQ5SRD0 308 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 RBFAQ8N0V3 343 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 TAGAPQ8N103 731 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 C17orf53Q8N3J3 647 aaPredicted RBP4.29□□□□□ -1.72
TRAV15-201ENST00000556680 TMEM199Q8N511 208 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PARP16Q8N5Y8 322 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 C16orf52Q8NHV5 167 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 BICD2Q8TD16 824 aa4.29□□□□□ -1.72
TRAV15-201ENST00000556680 PIGOQ8TEQ8 1089 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms