RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SPINT3P49223 89 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 HENMT1Q5T8I9 393 aaKnown RBP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 ALG1LQ6GMV1 187 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 CYB5D1Q6P9G0 228 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 PRSS42Q7Z5A4 293 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 PPP1R3BQ86XI6 285 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 TRIM48Q8IWZ4 208 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 CCHCR1Q8TD31 782 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 HSPH1Q92598 858 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 RNF31Q96EP0 1072 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 ELMO2Q96JJ3 720 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 TDRD1Q9BXT4 1180 aaKnown RBP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 MRPL47Q9HD33 250 aaKnown RBP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 LHX9Q9NQ69 397 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 KLC4Q9NSK0 619 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 HAUS2Q9NVX0 235 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 PKD2L2Q9NZM6 624 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 AMACRQ9UHK6 382 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 GPR89AB7ZAQ6 455 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 DNAJB5O75953 348 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PRLP01236 227 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 GPR89BP0CG08 455 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 RARAP10276 462 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 SLC19A1P41440 591 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 LEPRP48357 1165 aaKnown RBP11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PGDP52209 483 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 DSC2Q02487 901 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 IHHQ14623 411 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 CACHD1Q5VU97 1274 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 CT55Q8WUE5 264 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 THAP4Q8WY91 577 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 ZDHHC12Q96GR4 267 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 FCRL4Q96PJ5 515 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 GPR87Q9BY21 358 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PCDH9Q9HC56 1237 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PCDH18Q9HCL0 1135 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PDE7BQ9NP56 450 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 SCHIP1Q9P0W5 487 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-221ENST00000556571 ATXN10Q9UBB4 475 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 MAP4K5Q9Y4K4 846 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 PCDHGA9Q9Y5G4 932 aaKnown RBP11.71□□□□□ -0.53
ACTN1-221ENST00000556571 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
ACTN1-221ENST00000556571 MATN3O15232 486 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 KIF1CO43896 1103 aaKnown RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 SEMA7AO75326 666 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 MTA2O94776 668 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 DDAH2O95865 285 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 MYBL1P10243 752 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TCF4P15884 667 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF8P17098 575 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 NELFEP18615 380 aaKnown RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 CAPZBP47756 277 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF165P49910 485 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 UGT8Q16880 541 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ANO6Q4KMQ2 910 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 RBM12BQ8IXT5 1001 aaKnown RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 LPCAT1Q8NF37 534 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ARRDC2Q8TBH0 407 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TEKT4Q8WW24 435 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 MAML1Q92585 1016 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF653Q96CK0 615 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 SLC25A23Q9BV35 468 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TRIM55Q9BYV6 548 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 BRD8Q9H0E9 1235 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 OR2AG1Q9H205 316 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 MLXIPLQ9NP71 852 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 POT1Q9NUX5 634 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 RBM22Q9NW64 420 aaKnown RBP eCLIP11.7□□□□□ -0.547e-6■■■□□ 17.4
ACTN1-221ENST00000556571 ZNF624Q9P2J8 865 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 RCOR3Q9P2K3 495 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 EPHA6Q9UF33 1036 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TTLL3Q9Y4R7 772 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 HIVEP3Q5T1R4 2406 aa11.7□□□□□ -0.54
ACTN1-221ENST00000556571 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
ACTN1-221ENST00000556571 SMTNL1A8MU46 457 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 PDZK1P1A8MUH7 402 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 ANKRD66B4E2M5 251 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 CHUKO15111 745 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 SLC25A14O95258 325 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 RPS15P62841 145 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms