RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PCYT2Q99447 389 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 SH2D3AQ9BRG2 576 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 FUZQ9BT04 418 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 MSTO1Q9BUK6 570 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PACSIN1Q9BY11 444 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TMEM117Q9H0C3 514 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CHST8Q9H2A9 424 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 WDCPQ9H6R7 721 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CHODLQ9H9P2 273 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 UBE2TQ9NPD8 197 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 PRMT7Q9NVM4 692 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 HCFC1R1Q9NWW0 138 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 RAB20Q9NX57 234 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 COQ3Q9NZJ6 369 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 NDUFAF4Q9P032 175 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 LCMT1Q9UIC8 334 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 SNX12Q9UMY4 172 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CAMK2AQ9UQM7 478 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 DNAJC16Q9Y2G8 782 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 DERAQ9Y315 318 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 SIP14410 1827 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF236Q9UL36 1845 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 KAT6AQ92794 2004 aa5.21□□□□□ -1.57
SRP54-211ENST00000556445 A0A1W2PS29 197 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TARSL2A2RTX5 802 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 GOLGA8IPA6NC78 632 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 GOLGA8JA6NMD2 632 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ZAR1LA6NP61 321 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 LRRIQ3A6PVS8 624 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 MIF4GDA9UHW6 222 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 OGTO15294 1046 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 PRPSAP2O60256 369 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 RTN2O75298 545 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 PPFIA2O75334 1257 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ERN1O75460 977 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 TPPPO94811 219 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 MOCS3O95396 460 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 METTL18O95568 372 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ATP1A1P05023 1023 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 LGALS2P05162 132 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 DLDP09622 509 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 UBL4AP11441 157 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CYP2A6P11509 494 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 H2AFXP16104 143 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 MALP21145 153 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 KLRC1P26715 233 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 EPHA8P29322 1005 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 HOXA11P31270 313 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 AKT1P31749 480 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 GP5P40197 560 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TKTL1P51854 596 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 BCAT1P54687 386 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 HADHBP55084 474 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 MAP2K1Q02750 393 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 LAMTOR4Q0VGL1 99 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 SLC13A2Q13183 592 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 GPS2Q13227 327 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CAPSQ13938 189 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 NFE2L1Q14494 772 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 NAA25Q14CX7 972 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 HSDL1Q3SXM5 330 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 FAM69AQ5T7M9 428 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TAPT1Q6NXT6 567 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 SLC39A4Q6P5W5 647 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CYP20A1Q6UW02 462 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 DLK2Q6UY11 383 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TRIM72Q6ZMU5 477 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 Q6ZNX1 250 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ZNF575Q86XF7 245 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CBWD2Q8IUF1 395 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 WDR49Q8IV35 697 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CD302Q8IX05 232 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 FBXO16Q8IX29 292 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 KIAA2013Q8IYS2 634 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 FAM71AQ8IYT1 594 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 LNX2Q8N448 690 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 MMGT1Q8N4V1 131 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TDRD5Q8NAT2 981 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 RNF149Q8NC42 400 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ZBTB44Q8NCP5 570 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TMIEQ8NEW7 156 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 METTL6Q8TCB7 284 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 BRSK1Q8TDC3 778 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 U2AF1L4Q8WU68 220 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 PRPF31Q8WWY3 499 aaKnown RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 SHC3Q92529 594 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 RSC1A1Q92681 617 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 VPS33AQ96AX1 596 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CCDC127Q96BQ5 260 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 SAAL1Q96ER3 474 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ANKRD36BP1Q96IX9 119 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 OSBPL9Q96SU4 736 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 NAP1L3Q99457 506 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 AGPAT1Q99943 283 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CITED2Q99967 270 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 FAM213AQ9BRX8 229 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TCHPQ9BT92 498 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 FAM124BQ9H5Z6 455 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 TBC1D23Q9NUY8 699 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TAS2R10Q9NYW0 307 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms