RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PDZD7Q9H5P4 517 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 MRPL40Q9NQ50 206 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 XPNPEP3Q9NQH7 507 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PAPOLBQ9NRJ5 636 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FAM49BQ9NUQ9 324 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 NSMCE4AQ9NXX6 385 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DPP3Q9NY33 737 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TAS2R1Q9NYW7 299 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 GPRC5BQ9NZH0 403 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SEPT10Q9P0V9 454 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ARMCX1Q9P291 453 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 KLHL8Q9P2G9 620 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 HMGXB4Q9UGU5 601 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 STAP1Q9ULZ2 295 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ARHGAP26Q9UNA1 814 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CLCA2Q9UQC9 943 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DNAJC16Q9Y2G8 782 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CACNA1HO95180 2353 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 IGKV6-21A0A0C4DH24 114 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 DPPA5A6NC42 116 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM43BA6NCK2 446 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MEI4A8MW99 385 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PRR5-ARHGAP8B1AHC4 643 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SLCO1B7G3V0H7 640 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RNF103O00237 685 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CXCL11O14625 94 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TPP1O14773 563 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM24O15164 1050 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PSMD3O43242 534 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 B4GALT5O43286 388 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 AVILO75366 819 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CSDE1O75534 798 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 DAB1O75553 588 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GCATO75600 419 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RFPL1O75677 317 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PIAS1O75925 651 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TOX4O94842 621 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LINGO3P0C6S8 592 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 UBTFL6P0CB48 400 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TXNP10599 105 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RALBP11234 206 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GM2AP17900 193 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 NCF2P19878 526 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CYP2B6P20813 491 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FBLP22087 321 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ACAT1P24752 427 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ITGB8P26012 769 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MGAT1P26572 445 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ADORA2BP29275 332 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TYK2P29597 1187 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SPRP35270 261 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 HADHAP40939 763 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GPD2P43304 727 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GCLCP48506 637 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GPR15P49685 360 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CCNHP51946 323 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 EPHB1P54762 984 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CSE1LP55060 971 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 POLE2P56282 527 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 NANOS3P60323 173 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ACTR3P61158 418 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ABCE1P61221 599 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RPL10AP62906 217 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CCNA1P78396 465 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ARHGAP8P85298 464 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FPGSQ05932 587 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 POU5F1BQ06416 359 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TBL3Q12788 808 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GRIK3Q13003 919 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MED21Q13503 144 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC32Q14392 662 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PDK1Q15118 436 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TAF5Q15542 800 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MAPRE2Q15555 327 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TRIP10Q15642 601 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PDCD2Q16342 344 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 DPYSL2Q16555 572 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LY6KQ17RY6 165 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GRAMD1BQ3KR37 738 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TEX44Q53QW1 395 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 HSP90AA5PQ58FG0 334 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GPR158Q5T848 1215 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 STEAP4Q687X5 459 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ARHGAP17Q68EM7 881 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 KIAA1841Q6NSI8 718 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZFP1Q6P2D0 407 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC8BQ6P9F7 803 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MTHFD1LQ6UB35 978 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 OLFML1Q6UWY5 402 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TIFABQ6ZNK6 161 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 Q6ZPA2 131 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZCCHC23Q6ZST2 131 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RAPH1Q70E73 1250 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ARMCX2Q7L311 632 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FASTKD5Q7L8L6 764 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SLC26A9Q7LBE3 791 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 STRADAQ7RTN6 431 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms