RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GPRC6AQ5T6X5 926 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 TSSK4Q6SA08 328 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 GPATCH11Q8N954 259 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 TP53I13Q8NBR0 393 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-208ENST00000555905 PLA2G15Q8NCC3 412 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 DDHD1Q8NEL9 900 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 CADM4Q8NFZ8 388 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 LPGAT1Q92604 370 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 HIC2Q96JB3 615 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 ELMO2Q96JJ3 720 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 SH3GL2Q99962 352 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 MCMBPQ9BTE3 642 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 ZCCHC2Q9C0B9 1178 aaKnown RBP10.93□□□□□ -0.66
TMEM260-208ENST00000555905 WDR26Q9H7D7 661 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 TMBIM4Q9HC24 238 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 PHPT1Q9NRX4 125 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-208ENST00000555905 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 GNPTGQ9UJJ9 305 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 DMTF1Q9Y222 760 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 INVSQ9Y283 1065 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 PCDHB1Q9Y5F3 818 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 COMMD10Q9Y6G5 202 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 DOCK9Q9BZ29 2069 aa10.93□□□□□ -0.66
TMEM260-208ENST00000555905 IGLV3-16A0A075B6K0 115 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FAM95CA0A1B0GW59 222 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 TRIM49D1C9J1S8 452 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 H3BMM5 538 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 TNFRSF10AO00220 468 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 RAD51BO15315 384 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 OR1I1O60431 355 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 SOD1P00441 154 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 ESR1P03372 595 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 MT-ND3P03897 115 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 RPS3P23396 243 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FMO4P31512 558 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 NSG1P42857 185 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FNTBP49356 437 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 SLC12A2P55011 1212 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 POU4F1Q01851 419 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 DMWDQ09019 674 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 AGBL2Q5U5Z8 902 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 PTRHD1Q6GMV3 140 aaKnown RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 C11orf74Q86VG3 221 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 WDR5BQ86VZ2 330 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 LONP2Q86WA8 852 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 HEATR4Q86WZ0 1026 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 PNPLA1Q8N8W4 532 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 SNX19Q92543 992 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 BIRC7Q96CA5 298 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 KLF6Q99612 283 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 GPR22Q99680 433 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FZD3Q9NPG1 666 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 MED4Q9NPJ6 270 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 MBNL1Q9NR56 388 aaKnown RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 EURLQ9NYK6 297 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 MBD1Q9UIS9 605 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 FBXO4Q9UKT5 387 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 TMPRSS11EQ9UL52 423 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 SLC39A10Q9ULF5 831 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 CNOT6Q9ULM6 557 aaKnown RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 MTO1Q9Y2Z2 717 aaKnown RBP10.92□□□□□ -0.66
TMEM260-208ENST00000555905 EML5Q05BV3 1969 aa10.92□□□□□ -0.66
TMEM260-208ENST00000555905 METTL12A8MUP2 240 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 MEI4A8MW99 385 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 C10orf142B7Z368 130 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 PRAMEF26H0Y7S4 382 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 QSOX1O00391 747 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 AP2A2O94973 939 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 OR56A5P0C7T3 313 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TDGF1P13385 188 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 ATP1B2P14415 290 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-208ENST00000555905 PKMP14618 531 aaKnown RBP10.91□□□□□ -0.66
TMEM260-208ENST00000555905 SAT1P21673 171 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CA5AP35218 305 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 IGFALSP35858 605 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TRIM23P36406 574 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 SERPINB8P50452 374 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CDK3Q00526 305 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TMEM115Q12893 351 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 GTF2H3Q13889 308 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 HECTD2Q5U5R9 776 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 FAM45BPQ6NSW5 357 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 MACC1Q6ZN28 852 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TIFABQ6ZNK6 161 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 PELI3Q8N2H9 469 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 DCLK2Q8N568 766 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 FAM45AQ8TCE6 357 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 SERAC1Q96JX3 654 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 ATP6V1G3Q96LB4 118 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms