RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 LINC00303Q3SY05 128 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 MFSD7Q6UXD7 560 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 NPNTQ6UXI9 565 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 WASH2PQ6VEQ5 465 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 ADGRG6Q86SQ4 1221 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 TFB1MQ8WVM0 346 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 ART4Q93070 314 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 NKD1Q969G9 470 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 GPR63Q9BZJ6 419 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 WASH6PQ9NQA3 447 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 FBXO8Q9NRD0 319 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 CPNE7Q9UBL6 633 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 FAM153AQ9UHL3 310 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 KCNK6Q9Y257 313 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 COL6A6A6NMZ7 2263 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 BSNQ9UPA5 3926 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 J3QKU1 62 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 CAPN5O15484 640 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 KCNJ13O60928 360 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 BPIP17213 487 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 UGT1A3P35503 534 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 MC2RQ01718 297 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 AGAP9Q5VTM2 703 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 ABRAXAS1Q6UWZ7 409 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 LRRTM4Q86VH4 590 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 SPATA22Q8NHS9 363 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 P3H4Q92791 437 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 CEP41Q9BYV8 373 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 SPRY4Q9C004 299 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 OR2AG1Q9H205 316 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 HACD3Q9P035 362 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 SHOC2Q9UQ13 582 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 PIEZO2Q9H5I5 2752 aa12.53□□□□□ -0.4
HNRNPC-221ENST00000555883 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 HACD1B0YJ81 288 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 CST8O60676 142 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 C9P02748 559 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 CD68P34810 354 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 DYNLT1P63172 113 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 NFATC2Q13469 925 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 PCSK7Q16549 785 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 KDELC1Q6UW63 502 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 CEACAM20Q6UY09 585 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 VASH2Q86V25 355 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 FAM129CQ86XR2 697 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 BRSK1Q8TDC3 778 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 NCSTNQ92542 709 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 PMEPA1Q969W9 287 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 RTP4Q96DX8 246 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 FCRL5Q96RD9 977 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC12A9Q9BXP2 914 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 TRIT1Q9H3H1 467 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 KLC4Q9NSK0 619 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 POT1Q9NUX5 634 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 OCIAD1Q9NX40 245 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 PILRAQ9UKJ1 303 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 TMEM184BQ9Y519 407 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 ALG6Q9Y672 507 aa12.52□□□□□ -0.41
HNRNPC-221ENST00000555883 TRBV23OR9-2A0A075B6M9 112 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 hCG_1818297A0A087WSY0 165 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SNX2O60749 519 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 PMPCBO75439 489 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 CDK14O94921 469 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 PIRTP0C851 137 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 VCLP18206 1134 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 WT1P19544 449 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 MPSTP25325 297 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 MAP4P27816 1152 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 WNT3AP56704 352 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms