RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GPR39O43194 453 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 PMLP29590 882 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 NSG1P42857 185 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 PMS2P54278 862 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 ZNF470Q6ECI4 717 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 PARGQ86W56 976 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 RBFAQ8N0V3 343 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 DCUN1D1Q96GG9 259 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 SCARF2Q96GP6 870 aaPredicted RBP16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 ARRDC1-AS1Q9H2J1 176 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 FAM96AQ9H5X1 160 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 VPS37BQ9H9H4 285 aa16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 INTS10Q9NVR2 710 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 MARCH4Q9P2E8 410 aaPredicted RBP16.27■□□□□ 0.2
SPTLC2-203ENST00000554901 TMEM202A6NGA9 273 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 QSOX1O00391 747 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 DFNA5O60443 496 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 CDK14O94921 469 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 IVLP07476 585 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 SYPP08247 313 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ABHD2P08910 425 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ERVK-10P10266 1014 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ZNF7P17097 686 aaPredicted RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 MSH3P20585 1137 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 CTSKP43235 329 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 CDKN1CP49918 316 aaPredicted RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 BLKP51451 505 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ADARP55265 1226 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 TMEM115Q12893 351 aaPredicted RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 NAB1Q13506 487 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 FZD2Q14332 565 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 DBN1Q16643 649 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 TRMT10BQ6PF06 316 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 IL27RAQ6UWB1 636 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ADGRG6Q86SQ4 1221 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 LRRC6Q86X45 466 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 GSPT2Q8IYD1 628 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 OTUD6BQ8N6M0 293 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 AENQ8WTP8 325 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 CAVIN3Q969G5 261 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 NUSAP1Q9BXS6 441 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 PPANQ9NQ55 473 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 ZFATQ9P243 1243 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 KLQ9UEF7 1012 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 GPR34Q9UPC5 381 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 OAS3Q9Y6K5 1087 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 DGKBQ9Y6T7 804 aa16.26■□□□□ 0.19
SPTLC2-203ENST00000554901 A0A1B0GVT2 93 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 KLHL33A6NCF5 533 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 FAM159BA6NKW6 160 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 KHNYNO15037 678 aaKnown RBP16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 CHUKO15111 745 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 NUAK1O60285 661 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 NDUFS3O75489 264 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 AP2A2O94973 939 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 ASMTLO95671 621 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 CFIP05156 583 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 CEACAM5P06731 702 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 AKT1P31749 480 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 CA5AP35218 305 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 GTF2H3Q13889 308 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 SEMA3AQ14563 771 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 TRIM61Q5EBN2 209 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 TEDDM1Q5T9Z0 273 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 ENPP7Q6UWV6 458 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 KDM7AQ6ZMT4 941 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 TRIM74Q86UV6 250 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 SLC26A11Q86WA9 606 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 SPATS2Q86XZ4 545 aaKnown RBP16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 UNC5BQ8IZJ1 945 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 C2CD4AQ8NCU7 369 aaPredicted RBP16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 FAM86C1Q9NVL1 165 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 IL1RAPL1Q9NZN1 696 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 ATXN10Q9UBB4 475 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 FBXO5Q9UKT4 447 aa16.25■□□□□ 0.19
SPTLC2-203ENST00000554901 PRSS38A1L453 326 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 GOLGA8KD6RF30 607 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 FOXD2O60548 495 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ERLIN1O75477 346 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 RASGRP1O95267 797 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ZNF806P0C7X5 589 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 PRSS56P0CW18 603 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ATP1B2P14415 290 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 LEPRP48357 1165 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 SRP54P61011 504 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 PPARDQ03181 441 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 BRD3Q15059 726 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 KIF19Q2TAC6 998 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 KHDC1Q4VXA5 237 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 TPRG1LQ5T0D9 272 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 LAYNQ6UX15 382 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CAPN12Q6ZSI9 719 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CYTH2Q99418 400 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 OR2AG1Q9H205 316 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ACSS3Q9H6R3 686 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 IARS2Q9NSE4 1012 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 PCDHB1Q9Y5F3 818 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms