RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PHF19Q5T6S3 580 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 MEI1Q5TIA1 1274 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ZDHHC20Q5W0Z9 365 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 C19orf48Q6RUI8 117 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 SPRED1Q7Z699 444 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ADGRG6Q86SQ4 1221 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 LRRTM4Q86VH4 590 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ZNF761Q86XN6 746 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 SLC13A5Q86YT5 568 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 TRAPPC5Q8IUR0 188 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 WDFY3Q8IZQ1 3526 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 NAGSQ8N159 534 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UBE2Q2Q8WVN8 375 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 SMG1Q96Q15 3661 aaKnown RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 STRADBQ9C0K7 418 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 STN1Q9H668 368 aaKnown RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 POLR1BQ9H9Y6 1135 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A7Q9HAW7 530 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A10Q9HAW8 530 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A8Q9HAW9 530 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 IL26Q9NPH9 171 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 IL17CQ9P0M4 197 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 APPL1Q9UKG1 709 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ZNF148Q9UQR1 794 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 DNAJC16Q9Y2G8 782 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 PPP2R2CQ9Y2T4 447 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 PCYT1BQ9Y5K3 369 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ARL5AQ9Y689 179 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 GCN1Q92616 2671 aaKnown RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 CCDC187A0A096LP49 1063 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 KMOO15229 486 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 VEGFDO43915 354 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 PPFIA2O75334 1257 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 CRTAMO95727 393 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 SLC2A4P14672 509 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 PNLIPP16233 465 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 AKT1P31749 480 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 ADRA1AP35348 466 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 LSSP48449 732 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 GDF10P55107 478 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TMPRSS15P98073 1019 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 ITGA9Q13797 1035 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 SEPT6Q14141 434 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TAF1AQ15573 450 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 RANBP10Q6VN20 620 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 LRRC69Q6ZNQ3 347 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 USP53Q70EK8 1073 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 B3GNT8Q7Z7M8 397 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 LSMEM2Q8N112 164 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TRIM58Q8NG06 486 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 OR4K2Q8NGD2 314 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 WDR36Q8NI36 951 aaKnown RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 SLC37A2Q8TED4 501 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 ANP32BQ92688 251 aaKnown RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 GRAMD1AQ96CP6 724 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TMEM74Q96NL1 305 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 VPS35Q96QK1 796 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 SLC38A3Q99624 504 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 ZCCHC2Q9C0B9 1178 aaKnown RBP10.53□□□□□ -0.72
SHMT2-213ENST00000554600 LRRC40Q9H9A6 602 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 RDH14Q9HBH5 336 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 KCNK4Q9NYG8 393 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 TBC1D29Q9UFV1 150 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 KCTD3Q9Y597 815 aa10.53□□□□□ -0.72
SHMT2-213ENST00000554600 PDZK1P1A8MUH7 402 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 GPR89AB7ZAQ6 455 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 E7EVH7 732 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PPM1DO15297 605 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 RRP8O43159 456 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 GPR39O43194 453 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PSMD3O43242 534 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 B4GAT1O43505 415 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TLX3O43711 291 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 LIASO43766 372 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 CEP104O60308 925 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PRAMEF1O95521 474 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 METTL18O95568 372 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 EML2O95834 649 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 GPR89BP0CG08 455 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 F3P13726 295 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF7P17097 686 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TPH1P17752 444 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 VCLP18206 1134 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 MSH3P20585 1137 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 MAPK9P45984 424 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PDX1P52945 283 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 B4GALNT1Q00973 533 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 PDE1BQ01064 536 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC173Q0VFZ6 552 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM115Q12893 351 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 NFATC2Q13469 925 aa10.52□□□□□ -0.73
SHMT2-213ENST00000554600 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
SHMT2-213ENST00000554600 TBC1D25Q3MII6 688 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms