RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TRIM31Q9BZY9 425 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 DPEP2Q9H4A9 486 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 MRPL40Q9NQ50 206 aaKnown RBP13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 LRIT1Q9P2V4 623 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 ASIC3Q9UHC3 531 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 RSPH14Q9UHP6 348 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 APPL1Q9UKG1 709 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 SNX24Q9Y343 169 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
SPTLC2-202ENST00000554365 TCRBV7S3A2A0A539 114 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ESYT3A0FGR9 886 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 DNALI1O14645 258 aaPredicted RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 CTIFO43310 598 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ITGB2P05107 769 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 FAM87AP0C7U9 286 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 MAGEA6P43360 314 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 DRG2P55039 364 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 TUBB4BP68371 445 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 DSC2Q02487 901 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ZFP36L1Q07352 338 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ZNF235Q14590 738 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 KCNJ11Q14654 390 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 AGERQ15109 404 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 C14orf28Q4W4Y0 310 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ANKRD22Q5VYY1 191 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 KCTD11Q693B1 232 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ITPRIPL1Q6GPH6 555 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 XKR5Q6UX68 686 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 C4orf22Q6V702 233 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ZSWIM9Q86XI8 627 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ZSCAN1Q8NBB4 408 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 MYRIPQ8NFW9 859 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 CPT1BQ92523 772 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 USP7Q93009 1102 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 IMP4Q96G21 291 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 ZNF641Q96N77 438 aaPredicted RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 RAB17Q9H0T7 212 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 TMEM168Q9H0V1 697 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 SLC25A51Q9H1U9 297 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 DPH5Q9H2P9 285 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 FGF22Q9HCT0 170 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 RAB6BQ9NRW1 208 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 FOXJ2Q9P0K8 574 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 IL17BQ9UHF5 180 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 UTP11Q9Y3A2 253 aaKnown RBP13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 DGKBQ9Y6T7 804 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 LRP4O75096 1905 aa13.94□□□□□ -0.18
SPTLC2-202ENST00000554365 RECQL5O94762 991 aaPredicted RBP13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 TMEM63AO94886 807 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 ELFN1P0C7U0 828 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 PNLIPP16233 465 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 KELP23276 732 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SERPINA4P29622 427 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 ECHS1P30084 290 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 FDFT1P37268 417 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 HSPA9P38646 679 aaKnown RBP13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 ADCY8P40145 1251 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 KIAA1024LP59773 190 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 CYP4F2P78329 520 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 NSUN2Q08J23 767 aaKnown RBP eCLIP13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 MAP9Q49MG5 647 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 IZUMO3Q5VZ72 239 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 OGFOD3Q6PK18 319 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 KDELC1Q6UW63 502 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 ZDHHC24Q6UX98 284 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 TMPRSS9Q7Z410 1059 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SPATA22Q8NHS9 363 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 CCL4L1Q8NHW4 92 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 UBXN4Q92575 508 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SNF8Q96H20 258 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 NUDCD1Q96RS6 583 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 TUBGCP5Q96RT8 1024 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 POLR1EQ9GZS1 481 aaKnown RBP13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SEMA6CQ9H3T2 930 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 ATP13A3Q9H7F0 1226 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 CYP4F12Q9HCS2 524 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 WHRNQ9P202 907 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 LRRK1Q38SD2 2015 aa13.93□□□□□ -0.18
SPTLC2-202ENST00000554365 A8MX80 341 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 MT-CYBP00156 380 aaPredicted RBP13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 CSNK1DP48730 415 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 TERF1P54274 439 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 HLTFQ14527 1009 aaKnown RBP eCLIP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms