RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FEM1CQ96JP0 617 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 TSNARE1Q96NA8 513 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 ZYG11BQ9C0D3 744 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 GPN2Q9H9Y4 310 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-207ENST00000553837 CCM2LQ9NUG4 571 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-207ENST00000553837 CACNA2D2Q9NY47 1150 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 IL37Q9NZH6 218 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 MARCH4Q9P2E8 410 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-207ENST00000553837 KLHL3Q9UH77 587 aa12.18□□□□□ -0.46
SHMT2-207ENST00000553837 IGLV3-10A0A075B6K4 115 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 CLDN25C9JDP6 229 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 TMEM189-UBE2V1I3L0A0 370 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 MUSKO15146 869 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 MSL3P1P0C860 447 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 IL10P22301 178 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 ETFBP38117 255 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 SERPINH1P50454 418 aaKnown RBP12.17□□□□□ -0.46
SHMT2-207ENST00000553837 HLCSP50747 726 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 ARPP19P56211 112 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 OCA2Q04671 838 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 RALGDSQ12967 914 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 SIRPB2Q5JXA9 342 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 MARC1Q5VT66 337 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 TMEM207Q6UWW9 146 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 CYP2U1Q7Z449 544 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 CADM3Q8N126 398 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 ZUFSPQ96AP4 578 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 POMKQ9H5K3 350 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 TMEM181Q9P2C4 612 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 ERVK-11Q9UQG0 969 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
SHMT2-207ENST00000553837 CPNE6O95741 557 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 EOMESO95936 686 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 ATXN1LP0C7T5 689 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 JUNBP17275 347 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 PAMP19021 973 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MATN1P21941 496 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 ACVRL1P37023 503 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 KCNC1P48547 511 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 POLD2P49005 469 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 RENBPP51606 427 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 POU4F1Q01851 419 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SUZ12Q15022 739 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TECRLQ5HYJ1 363 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TBCELQ5QJ74 424 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 AGAP7PQ5VUJ5 663 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 REP15Q6BDI9 236 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TEX26Q8N6G2 289 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SPERTQ8NA61 448 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TADA1Q96BN2 335 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FUBP3Q96I24 572 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MAELQ96JY0 434 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MRPL57Q9BQC6 102 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TRIM15Q9C019 465 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 KLHL25Q9H0H3 589 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 RAD21L1Q9H4I0 556 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MAGEE1Q9HCI5 957 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CYP4F12Q9HCS2 524 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 HMG20AQ9NP66 347 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FAM92AA1XBS5 289 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 ANKRD34BA5PLL1 514 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MROH6A6NGR9 719 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SEC14L2O76054 403 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FASP25445 335 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 DNAJB1P25685 340 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CAPGP40121 348 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 GRIA3P42263 894 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 LEPRP48357 1165 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CDKN2DP55273 166 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TAF10Q12962 218 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 INPP5AQ14642 412 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CTXN3Q4LDR2 81 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CCNYL2Q5T2Q4 361 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FAM171A1Q5VUB5 890 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 TTC30BQ8N4P2 665 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FBXO32Q969P5 355 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SH3YL1Q96HL8 342 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 GLT1D1Q96MS3 346 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 SLC39A3Q9BRY0 314 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 PRKD2Q9BZL6 878 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 CEP44Q9C0F1 390 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 FBXO44Q9H4M3 255 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
SHMT2-207ENST00000553837 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-207ENST00000553837 A0A087X1B8 175 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms