RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 LIPT2A6NK58 231 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 EIF4E1BA6NMX2 242 aaKnown RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 C15orf62A8K5M9 175 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 DVL1O14640 695 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 SMAD9O15198 467 aaKnown RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 PRKNO60260 465 aaPredicted RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 TMCC2O75069 709 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 SOCS5O75159 536 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 SLC22A3O75751 556 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 MLYCDO95822 493 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 PRSS1P07477 247 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 INHBAP08476 426 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 RNF224P0DH78 156 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 CSF2RAP15509 400 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 IL7RP16871 459 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 RGS2P41220 211 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 ARCN1P48444 511 aaKnown RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 DVL1P1P54792 670 aaPredicted RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 ACVR2BQ13705 512 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 RAB6CQ53S08 254 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 PLA2G4FQ68DD2 849 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 JADE1Q6IE81 842 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 GAGE2AQ6NT46 116 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 SLC27A1Q6PCB7 646 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 CYP20A1Q6UW02 462 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 Q75L30 129 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 CPLX4Q7Z7G2 160 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 TICAM1Q8IUC6 712 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 PM20D2Q8IYS1 436 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 CNTROBQ8N137 903 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 SLC24A4Q8NFF2 622 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 GRAPLQ8TC17 118 aaPredicted RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 MOAP1Q96BY2 351 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 FBXO17Q96EF6 278 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 C17orf77Q96MU5 243 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 DACH2Q96NX9 599 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 NCAPGQ9BPX3 1015 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 POLR3CQ9BUI4 534 aaPredicted RBP3.16□□□□□ -1.9
VRK1-202ENST00000553683 C1QTNF1Q9BXJ1 281 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 RAB6CQ9H0N0 254 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 EPB41L5Q9HCM4 733 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 MTMR10Q9NXD2 777 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 CLIC4Q9Y696 253 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 PRAG1Q86YV5 1406 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 KIF26BQ2KJY2 2108 aa3.16□□□□□ -1.9
VRK1-202ENST00000553683 FAM237BA0A1B0GVD1 139 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 A0A1W2PPI3 338 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 SNAP23O00161 211 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 ATP2A1O14983 1001 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 EIF3DO15371 548 aaKnown RBP eCLIP3.15□□□□□ -1.91
VRK1-202ENST00000553683 PCDH7O60245 1069 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 ACADLP28330 430 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 MAN1A1P33908 653 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 PBX3P40426 434 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 ISL1P61371 349 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 RUNX1T1Q06455 604 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 KIR2DS3Q14952 304 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 SLC35E4Q6ICL7 350 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 OR7E24Q6IFN5 339 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 FAM171BQ6P995 826 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 TPRG1Q6ZUI0 275 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 CIARTQ8N365 385 aaPredicted RBP3.15□□□□□ -1.91
VRK1-202ENST00000553683 TMTC2Q8N394 836 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 EMC1Q8N766 993 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 CNBD1Q8NA66 436 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 KLHDC9Q8NEP7 349 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 ACVR1CQ8NER5 493 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 LRRC8CQ8TDW0 803 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 UTP15Q8TED0 518 aaKnown RBP3.15□□□□□ -1.91
VRK1-202ENST00000553683 SLC38A5Q8WUX1 472 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 WBP2Q969T9 261 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 PHF21AQ96BD5 680 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 PERPQ96FX8 193 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 PGAM5Q96HS1 289 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 EGLN2Q96KS0 407 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 ZNF583Q96ND8 569 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 LRMDAQ9H2I8 198 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 TAAR2Q9P1P5 351 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 GAB2Q9UQC2 676 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 LYVE1Q9Y5Y7 322 aa3.15□□□□□ -1.91
VRK1-202ENST00000553683 C1orf226A1L170 272 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 A8MZ25 164 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 H0YIN7 160 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 EPB41L2O43491 1005 aaKnown RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 EDIL3O43854 480 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 CTSVO60911 334 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ICAM1P05362 532 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 DCTP40126 519 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 PIK3CAP42336 1068 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 AMPHP49418 695 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 CLCN3P51790 818 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 CEBPZQ03701 1054 aaKnown RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 MVPQ14764 893 aaKnown RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 CRYMQ14894 314 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 CCDC96Q2M329 555 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms