RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 EFCAB7A8K855 629 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 TRAFD1O14545 582 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 WNT11O96014 354 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 MMEP08473 750 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 MMP8P22894 467 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 SDC4P31431 198 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 CSTF2P33240 577 aaKnown RBP eCLIP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 MLLT10P55197 1068 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 GSCP56915 257 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 YBEYP58557 167 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 BPIFB4P59827 614 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 ABHD18Q0P651 414 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 ILF3Q12906 894 aaKnown RBP eCLIP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 PTP4A2Q12974 167 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 DEFB109BQ30KR1 87 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 PARP15Q460N3 678 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 DCAF12Q5T6F0 453 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 CAPRIN2Q6IMN6 1127 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 PNCKQ6P2M8 343 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 LRFN4Q6PJG9 635 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 SLC30A9Q6PML9 568 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 HEATR4Q86WZ0 1026 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 FAM129CQ86XR2 697 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 UNC5BQ8IZJ1 945 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 UMODL1-AS1Q8N2C9 162 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 FAM172AQ8WUF8 416 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 APOBEC4Q8WW27 367 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 COQ10AQ96MF6 247 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 TEFMQ96QE5 360 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 DPYSL5Q9BPU6 564 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 NAA15Q9BXJ9 866 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 TEX101Q9BY14 249 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 LRRC19Q9H756 370 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 LRRC4CQ9HCJ2 640 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 TRNAU1APQ9NX07 287 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 UBA2Q9UBT2 640 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 HOOK1Q9UJC3 728 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 NOCTQ9UK39 431 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 U3KQE9 123 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 DIDO1Q9BTC0 2240 aaKnown RBP7.25□□□□□ -1.25
ATXN3-219ENST00000553488 POLEQ07864 2286 aa7.25□□□□□ -1.25
ATXN3-219ENST00000553488 F8P00451 2351 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 F8VZ95 297 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 J3KR12 359 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 PRAMEF11O60813 436 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SOD1P00441 154 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CYP1A1P04798 512 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-219ENST00000553488 IVLP07476 585 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 KRT7P08729 469 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 F8A1P23610 371 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 TEAD1P28347 426 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 EPHB2P29323 1055 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SERPINA4P29622 427 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 STAT5AP42229 794 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 GNPDA1P46926 289 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 FASLGP48023 281 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CSNK1DP48730 415 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CDK3Q00526 305 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 MC2RQ01718 297 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 RAPGEF1Q13905 1077 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CNGA3Q16281 694 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CYP27C1Q4G0S4 372 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 MIIPQ5JXC2 388 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 TCTN3Q6NUS6 607 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 TMEM71Q6P5X7 295 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 ARHGAP22Q7Z5H3 698 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SRLQ86TD4 932 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 ZNF354CQ86Y25 554 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 MSANTD4Q8NCY6 345 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SLC20A1Q8WUM9 679 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 KIAA1143Q96AT1 154 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-219ENST00000553488 NUS1Q96E22 293 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 DTD2Q96FN9 168 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 CTRCQ99895 268 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 EFHD1Q9BUP0 239 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 PDCL3Q9H2J4 239 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 ATP13A3Q9H7F0 1226 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SUDS3Q9H7L9 328 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-219ENST00000553488 APMAPQ9HDC9 416 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SIDT1Q9NXL6 827 aaKnown RBP7.24□□□□□ -1.25
ATXN3-219ENST00000553488 B4GALT6Q9UBX8 382 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 RWDD2AQ9UIY3 292 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 MOSPD1Q9UJG1 213 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SUFUQ9UMX1 484 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 SLC17A4Q9Y2C5 497 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 PLEKHM1Q9Y4G2 1056 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 KCTD3Q9Y597 815 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 MRPS18BQ9Y676 258 aaKnown RBP7.24□□□□□ -1.25
ATXN3-219ENST00000553488 PDZD2O15018 2839 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 DCHS2Q6V1P9 2916 aa7.24□□□□□ -1.25
ATXN3-219ENST00000553488 TACC2O95359 2948 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 FGF10O15520 208 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 TEX33O43247 280 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 ZW10O43264 779 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 CCP110O43303 1012 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 STK17BO94768 372 aa7.23□□□□□ -1.25
ATXN3-219ENST00000553488 FGFR1OPO95684 399 aaKnown RBP7.23□□□□□ -1.25
ATXN3-219ENST00000553488 SPTBP11277 2137 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms