RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CCNI2Q6ZMN8 369 aaPredicted RBP18.23■□□□□ 0.51
CPSF2-202ENST00000553427 LRRTM4Q86VH4 590 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 GRK7Q8WTQ7 553 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 ZDHHC1Q8WTX9 485 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 PEX13Q92968 403 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 ULK4Q96C45 1275 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 DNAJC1Q96KC8 554 aaKnown RBP18.23■□□□□ 0.51
CPSF2-202ENST00000553427 TIMM29Q9BSF4 260 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 ARFGAP3Q9NP61 516 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 GULP1Q9UBP9 304 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 TPRP12270 2363 aaKnown RBP18.23■□□□□ 0.51
CPSF2-202ENST00000553427 HEATR9A2RTY3 570 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 CPED1A4D0V7 1026 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 PRR19A6NJB7 356 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 KMOO15229 486 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 GPR39O43194 453 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 NUDT21O43809 227 aaKnown RBP18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A9O60656 530 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 MTX2O75431 263 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 CDK14O94921 469 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 GLB1P16278 677 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A6P19224 532 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 SPINK2P20155 84 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ITGALP20701 1170 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A1P22309 533 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A4P22310 534 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A3P35503 534 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A5P35504 534 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 GRIA1P42261 906 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 BASP1P80723 227 aaKnown RBP18.22■□□□□ 0.51
CPSF2-202ENST00000553427 TMEM115Q12893 351 aaPredicted RBP18.22■□□□□ 0.51
CPSF2-202ENST00000553427 GTF2H3Q13889 308 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 SEPT6Q14141 434 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF648Q5T619 568 aaPredicted RBP18.22■□□□□ 0.51
CPSF2-202ENST00000553427 HES3Q5TGS1 186 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 CDCP2Q5VXM1 449 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ARMC3Q5W041 872 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 NLRP9Q7RTR0 991 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF438Q7Z4V0 828 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 SNX20Q7Z614 316 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF547Q8IVP9 402 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 DCBLD1Q8N8Z6 715 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 GDAP1Q8TB36 358 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 MAPK15Q8TD08 544 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 ASB8Q9H765 288 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A7Q9HAW7 530 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A10Q9HAW8 530 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 UGT1A8Q9HAW9 530 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 PIH1D1Q9NWS0 290 aaKnown RBP18.22■□□□□ 0.51
CPSF2-202ENST00000553427 PLEKHM1Q9Y4G2 1056 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 SAR1BQ9Y6B6 198 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 PTPRBP23467 1997 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 AKAP13Q12802 2813 aa18.22■□□□□ 0.51
CPSF2-202ENST00000553427 TRBV5-4A0A0C4DH59 114 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 A6NCN8 305 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 FANCGO15287 622 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 KCNJ13O60928 360 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 KRT14P02533 472 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ACP5P13686 325 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ADRA1DP25100 572 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 CA5AP35218 305 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ACVR1Q04771 509 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 KCNJ11Q14654 390 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 NR1D2Q14995 579 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 SKIDA1Q1XH10 827 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 PERM1Q5SV97 790 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 CHST15Q7LFX5 561 aaPredicted RBP18.21■□□□□ 0.51
CPSF2-202ENST00000553427 CREG2Q8IUH2 290 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 HEXDCQ8WVB3 486 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 GATA6Q92908 595 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 SLCO2A1Q92959 643 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF514Q96K75 400 aaPredicted RBP18.21■□□□□ 0.51
CPSF2-202ENST00000553427 TMEM121BQ9BXQ6 578 aaPredicted RBP18.21■□□□□ 0.51
CPSF2-202ENST00000553427 RNF14Q9UBS8 474 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 PRKAB1Q9Y478 270 aa18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ARHGEF17Q96PE2 2063 aaPredicted RBP18.21■□□□□ 0.51
CPSF2-202ENST00000553427 ASXL3Q9C0F0 2248 aa18.21■□□□□ 0.5
CPSF2-202ENST00000553427 MYLKQ15746 1914 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 TCEA3O75764 348 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 SLC2A4P14672 509 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 MC4RP32245 332 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 GPS1Q13098 491 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 CRTC3Q6UUV7 619 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 C11orf96Q7Z7L8 435 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 NAGSQ8N159 534 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 NXPE1Q8N323 547 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 SFRP1Q8N474 314 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 CCDC74AQ96AQ1 378 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 CDKN2AIPNLQ96HQ2 116 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 TTC25Q96NG3 672 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 CCDC3Q9BQI4 270 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 KCNK6Q9Y257 313 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 TCAF1Q9Y4C2 921 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 DNMT3AQ9Y6K1 912 aaPredicted RBP18.2■□□□□ 0.5
CPSF2-202ENST00000553427 SLC30A1Q9Y6M5 507 aa18.2■□□□□ 0.5
CPSF2-202ENST00000553427 KNTC1P50748 2209 aa18.19■□□□□ 0.5
CPSF2-202ENST00000553427 FRYQ5TBA9 3013 aa18.19■□□□□ 0.5
CPSF2-202ENST00000553427 IGLV3-16A0A075B6K0 115 aa18.19■□□□□ 0.5
CPSF2-202ENST00000553427 KLHL33A6NCF5 533 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms