RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 DNMT3AQ9Y6K1 912 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-204ENST00000553324 KIR2DS5A0A0G2JLQ3 304 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 A0A0G2JNG1 304 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 E7EVH7 732 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 KIR2DS3K7RE56 304 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 BUD23O43709 281 aaKnown RBP15.14■□□□□ 0.01
SHMT2-204ENST00000553324 CEP104O60308 925 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A9O60656 530 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A6P19224 532 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A1P22309 533 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A4P22310 534 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 ALDH4A1P30038 563 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A3P35503 534 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A5P35504 534 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 LMAN1P49257 510 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 MAZP56270 477 aaKnown RBP15.14■□□□□ 0.01
SHMT2-204ENST00000553324 B4GALNT1Q00973 533 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 EIF3IQ13347 325 aaKnown RBP15.14■□□□□ 0.01
SHMT2-204ENST00000553324 MSLNQ13421 630 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-204ENST00000553324 SPARCL1Q14515 664 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 KIR2DS5Q14953 304 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 LONRF2Q1L5Z9 754 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 IYDQ6PHW0 289 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 SPRED1Q7Z699 444 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 SLC9B2Q86UD5 537 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 PIM3Q86V86 326 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 SFRP1Q8N474 314 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 DDHD1Q8NEL9 900 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 HEXDCQ8WVB3 486 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 ULK4Q96C45 1275 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 PBKQ96KB5 322 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 NAP1L3Q99457 506 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-204ENST00000553324 DPYSL5Q9BPU6 564 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 POLR1BQ9H9Y6 1135 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A7Q9HAW7 530 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A10Q9HAW8 530 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 UGT1A8Q9HAW9 530 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 ARFGAP3Q9NP61 516 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 KLC4Q9NSK0 619 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 PCDHB1Q9Y5F3 818 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 PCDHGA8Q9Y5G5 932 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
SHMT2-204ENST00000553324 PLXNB3Q9ULL4 1909 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 AKAP13Q12802 2813 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 A0A1W2PQM1 296 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 KLHL33A6NCF5 533 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SRRM3A6NNA2 597 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 TAF4O00268 1085 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 MTX2O75431 263 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SRP72O76094 671 aaKnown RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 PRAMEF1O95521 474 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 CPNE6O95741 557 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 RALBP11234 206 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 F3P13726 295 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 ZNF7P17097 686 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 MSH3P20585 1137 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 INHBCP55103 352 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 GPLD1P80108 840 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 CDH17Q12864 832 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SQSTM1Q13501 440 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 OLIG2Q13516 323 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SNX1Q13596 522 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 INSCQ1MX18 579 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 ZNF648Q5T619 568 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 IGF2-ASQ6U949 168 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 GSTA5Q7RTV2 222 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SFTPA2Q8IWL1 248 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 DNAAF3Q8N9W5 541 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 WDR36Q8NI36 951 aaKnown RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 STYXQ8WUJ0 223 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 FGF11Q92914 225 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 TMEM159Q96B96 161 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 ZNF578Q96N58 590 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 ASB8Q9H765 288 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 ETNK1Q9HBU6 452 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 SARS2Q9NP81 518 aaKnown RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 TBC1D29Q9UFV1 150 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 TMPRSS11EQ9UL52 423 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 KCNK6Q9Y257 313 aa15.13■□□□□ 0.01
SHMT2-204ENST00000553324 PCYT1BQ9Y5K3 369 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-204ENST00000553324 D6RAR5 112 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 AP3B1O00203 1094 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 PPM1DO15297 605 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 B4GAT1O43505 415 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 LDB2O43679 373 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 KIF5CO60282 957 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 SNX2O60749 519 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 DXOO77932 396 aaKnown RBP15.12■□□□□ 0.01
SHMT2-204ENST00000553324 SUN1O94901 812 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 IDSP22304 550 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 RBMS1P29558 406 aaKnown RBP15.12■□□□□ 0.01
SHMT2-204ENST00000553324 CCKBRP32239 447 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 MLLT3P42568 568 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-204ENST00000553324 ERVPABLB-1P60509 514 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 GABREP78334 506 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 HHEXQ03014 270 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 NFATC2Q13469 925 aa15.12■□□□□ 0.01
SHMT2-204ENST00000553324 SIX1Q15475 284 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms