RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 INTS7Q9NVH2 962 aaKnown RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MARCH4Q9P2E8 410 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 NOBOXO60393 691 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ESRRBO95718 433 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF24P17028 368 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CCR1P32246 355 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SHMT2P34897 504 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PBX3P40426 434 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ACADVLP49748 655 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ARSDP51689 593 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 IL1RL1Q01638 556 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CNTN4Q8IWV2 1026 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 DUS3LQ96G46 650 aaKnown RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CD320Q9NPF0 282 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 FAM50BQ9Y247 325 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 RALGAPA2Q2PPJ7 1873 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TTC3P53804 2025 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 A0A0U1RQF3 1178 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 JAK1P23458 1154 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 CD86P42081 329 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 RPL34P49207 117 aaKnown RBP12.27□□□□□ -0.44
HDAC7-230ENST00000552960 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.44
HDAC7-230ENST00000552960 OCA2Q04671 838 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 DSC3Q14574 896 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 LCN8Q6JVE9 175 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.44
HDAC7-230ENST00000552960 LRRTM3Q86VH5 581 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 PCSK9Q8NBP7 692 aaKnown RBP12.27□□□□□ -0.44
HDAC7-230ENST00000552960 GABPB2Q8TAK5 448 aaPredicted RBP12.27□□□□□ -0.44
HDAC7-230ENST00000552960 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 BIRC7Q96CA5 298 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 ACOX2Q99424 681 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 SLC30A3Q99726 388 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 BDH2Q9BUT1 245 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 STARD7Q9NQZ5 370 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 POLG2Q9UHN1 485 aa12.27□□□□□ -0.44
HDAC7-230ENST00000552960 A8MU76 341 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 GNGT2O14610 69 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 FCGR1AP12314 374 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 OPRL1P41146 370 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 HLCSP50747 726 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 UFM1P61960 85 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 DNASE1L3Q13609 305 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 BROXQ5VW32 411 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 PRMT9Q6P2P2 845 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 HS3ST5Q8IZT8 346 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 ZMIZ2Q8NF64 920 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 FCRL5Q96RD9 977 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.45
HDAC7-230ENST00000552960 TET1Q8NFU7 2136 aa12.27□□□□□ -0.45
HDAC7-230ENST00000552960 CCDC154A6NI56 674 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GABRDO14764 452 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CLPXO76031 633 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GPIP06744 558 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CST5P28325 142 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CLCN5P51795 746 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HERVK_113P63132 956 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 NKX3-2P78367 333 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 LAPTM5Q13571 262 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GPNMBQ14956 572 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 MEP1AQ16819 746 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 KIAA0930Q6ICG6 404 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HACD2Q6Y1H2 254 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CALML6Q8TD86 181 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HPS1Q92902 700 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TBATAQ96M53 351 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 NSMCE2Q96MF7 247 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 ERVK-6Q9BXR3 956 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 KLHL25Q9H0H3 589 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SMURF2Q9HAU4 748 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SPATA7Q9P0W8 599 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SUN2Q9UH99 717 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 VPS51Q9UID3 782 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PSME2Q9UL46 239 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 EYSQ5T1H1 3165 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HSD17B1P14061 328 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PNPLA4P41247 253 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PGFP49763 221 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 OR4D2P58180 307 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 MTPNP58546 118 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GLYATQ6IB77 296 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 MINDY1Q8N5J2 469 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 ZNF784Q8NCA9 323 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 OR10T2Q8NGX3 314 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 FBXO30Q8TB52 745 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CASP10Q92851 521 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms