RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 GGT7Q9UJ14 662 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 MAD1L1Q9Y6D9 718 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 SCN8AQ9UQD0 1980 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 HEATR9A2RTY3 570 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TERTO14746 1132 aaKnown RBP11.31□□□□□ -0.6
TMEM116-218ENST00000552839 SUN1O94901 812 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TNFSF15O95150 251 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TPH1P17752 444 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 ITIH2P19823 946 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 NFKB2Q00653 900 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 FGL2Q14314 439 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 CNGA3Q16281 694 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 DEFB133Q30KQ1 61 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TMEM52BQ4KMG9 183 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TMEM259Q4ZIN3 620 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 RNASEH2BQ5TBB1 312 aaKnown RBP11.31□□□□□ -0.6
TMEM116-218ENST00000552839 CEP128Q6ZU80 1094 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 LYSMD3Q7Z3D4 306 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 CCDC25Q86WR0 208 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 DCP2Q8IU60 420 aaKnown RBP11.31□□□□□ -0.6
TMEM116-218ENST00000552839 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 ARL14Q8N4G2 192 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 FAM174AQ8TBP5 190 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 UBXN4Q92575 508 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 TADA1Q96BN2 335 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 NUS1Q96E22 293 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 MCCC1Q96RQ3 725 aaPredicted RBP11.31□□□□□ -0.6
TMEM116-218ENST00000552839 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 EPB41L5Q9HCM4 733 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 KCTD5Q9NXV2 234 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 HS3ST3A1Q9Y663 406 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 CSNK1G3Q9Y6M4 447 aa11.31□□□□□ -0.6
TMEM116-218ENST00000552839 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 SPTY2D1-AS1A0A0U1RR47 76 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 ESYT3A0FGR9 886 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PSMD11O00231 422 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 AREL1O15033 823 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 RAD51BO15315 384 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 AQP9O43315 295 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 TCEA3O75764 348 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 TMEM63AO94886 807 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 CLDN7O95471 211 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PRLP01236 227 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PCCBP05166 539 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PAMP19021 973 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 MGAT1P26572 445 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 ADRA1AP35348 466 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 NPY2RP49146 381 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PDX1P52945 283 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 PLTPP55058 493 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 MTM1Q13496 603 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 TAF1AQ15573 450 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 HIF1AQ16665 826 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 COLEC12Q5KU26 742 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 ANKRD22Q5VYY1 191 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 ALS2CLQ60I27 953 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 KCTD11Q693B1 232 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 LRRC8BQ6P9F7 803 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 RANBP10Q6VN20 620 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 CENPUQ71F23 418 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 NLRP9Q7RTR0 991 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 MCUQ8NE86 351 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 SLC17A9Q9BYT1 436 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-218ENST00000552839 COQ6Q9Y2Z9 468 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 NEU2Q9Y3R4 380 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 SPTA1P02549 2419 aa11.3□□□□□ -0.6
TMEM116-218ENST00000552839 CCDC187A0A096LP49 1063 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 H3BM21 787 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 FPGTO14772 594 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SPINT1O43278 529 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-218ENST00000552839 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 MLNP12872 115 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 JUNDP17535 347 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 ITGB6P18564 788 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SPAM1P38567 509 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 HADHAP40939 763 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms