RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LRRC53A6NM62 1247 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 FADS2P1A8MWK0 482 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 GPR89AB7ZAQ6 455 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 MATN3O15232 486 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 FURINP09958 794 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 GPR89BP0CG08 455 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 FGF5P12034 268 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 TCF4P15884 667 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 SH3BP2P78314 561 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 DNASE1L3Q13609 305 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 PIGHQ14442 188 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF569Q5MCW4 686 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 PPP1R3BQ86XI6 285 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 APLFQ8IW19 511 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 RNF31Q96EP0 1072 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 ZDHHC12Q96GR4 267 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 WDR24Q96S15 920 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 OR2AG1Q9H205 316 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 ANO10Q9NW15 660 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 RBM22Q9NW64 420 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 ATXN10Q9UBB4 475 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 ITPR2Q14571 2701 aa13.99□□□□□ -0.17
CHMP1A-210ENST00000551981 PDZK1P1A8MUH7 402 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 C21orf140B9A014 251 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 SPAG6O75602 509 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 PRLP01236 227 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF8P17098 575 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 CAPZBP47756 277 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 UQCRFS1P47985 274 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 LEPRP48357 1165 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 GALNT2Q10471 571 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 INSCQ1MX18 579 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 SASS6Q6UVJ0 657 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF571Q7Z3V5 609 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 PRSS42Q7Z5A4 293 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 TMEM135Q86UB9 458 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 RBM12BQ8IXT5 1001 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 CPT1CQ8TCG5 803 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 MAML1Q92585 1016 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 FATE1Q969F0 183 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 SPATA16Q9BXB7 569 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 ADGRE3Q9BY15 652 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 PDE7BQ9NP56 450 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
CHMP1A-210ENST00000551981 MFSD11O43934 449 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SLC25A14O95258 325 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 GNLYP22749 145 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 CCNCP24863 283 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 PGDP52209 483 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 KLHL30Q0D2K2 578 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SEMA5AQ13591 1074 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 IHHQ14623 411 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SEPT7Q16181 437 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 STX1AQ16623 288 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 IFI16Q16666 785 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 TDRD12Q587J7 1177 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 CACHD1Q5VU97 1274 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 CRTC3Q6UUV7 619 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 APTXQ7Z2E3 356 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 NIPA2Q8N8Q9 360 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 ZSCAN5AQ9BUG6 496 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 MLPHQ9BV36 600 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 BRD8Q9H0E9 1235 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 LHX9Q9NQ69 397 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 AIPL1Q9NZN9 384 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SCHIP1Q9P0W5 487 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 IP6K2Q9UHH9 426 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 ADGRG1Q9Y653 693 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 SLC30A1Q9Y6M5 507 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 CREBBPQ92793 2442 aa13.97□□□□□ -0.17
CHMP1A-210ENST00000551981 ANKRD66B4E2M5 251 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 DDX3XO00571 662 aaKnown RBP eCLIP13.96□□□□□ -0.173e-9■■■■□ 26.7
CHMP1A-210ENST00000551981 KMOO15229 486 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 SLC19A1P41440 591 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 PRKCIP41743 596 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 SSR1P43307 286 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 PAFAH1B3Q15102 231 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 QPCTQ16769 361 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 PDPK2PQ6A1A2 396 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 IRGCQ6NXR0 463 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 RBM43Q6ZSC3 357 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 FAM92BQ6ZTR7 304 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 LRRTM4Q86VH4 590 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 THAP4Q8WY91 577 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 KLHL6Q8WZ60 621 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 TSGA13Q96PP4 275 aa13.96□□□□□ -0.17
CHMP1A-210ENST00000551981 TIMM29Q9BSF4 260 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms