RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LRRTM4Q86VH4 590 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 NAGSQ8N159 534 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 OR13C4Q8NGS5 318 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF398Q8TD17 642 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 TIMM29Q9BSF4 260 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 SNX12Q9UMY4 172 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 LHX6Q9UPM6 363 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 PRKAB1Q9Y478 270 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 PLEKHM1Q9Y4G2 1056 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 KCTD3Q9Y597 815 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 AKAP13Q12802 2813 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 AGAP14A8MT82 685 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 H7C0S8 307 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 MTX2O75431 263 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 SRP72O76094 671 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 SLC2A4P14672 509 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 ITGALP20701 1170 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 KCNJ1P48048 391 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 XIAPP98170 497 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 TMEM115Q12893 351 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 TARDBPQ13148 414 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 NFATC2Q13469 925 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 POU6F1Q14863 301 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 NR1D2Q14995 579 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 CYP1B1Q16678 543 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF648Q5T619 568 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 PPP1R21Q6ZMI0 780 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF438Q7Z4V0 828 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 PRUNE1Q86TP1 453 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 SFTPA2Q8IWL1 248 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 OR52K1Q8NGK4 314 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 ULK4Q96C45 1275 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 DNAJC1Q96KC8 554 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 TTC25Q96NG3 672 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 ASB8Q9H765 288 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 PYCARDQ9ULZ3 195 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 KCNK6Q9Y257 313 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 RNF215Q9Y6U7 377 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 SCN8AQ9UQD0 1980 aa15.22■□□□□ 0.03
PRPF40B-211ENST00000551063 A6NCN8 305 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 NTN3O00634 580 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 KMOO15229 486 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 GPR39O43194 453 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A9O60656 530 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 KCNJ13O60928 360 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ECEL1O95672 775 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 APRTP07741 180 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ZSCAN5DPP0CG00 497 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 TPH1P17752 444 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A6P19224 532 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A1P22309 533 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A4P22310 534 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 PSMA3P25788 255 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A3P35503 534 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A5P35504 534 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 LAMB3Q13751 1172 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 SEPT6Q14141 434 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 SPIDRQ14159 915 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 INSCQ1MX18 579 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 CRTC3Q6UUV7 619 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 RBM44Q6ZP01 1051 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 SNX20Q7Z614 316 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 TRAPPC5Q8IUR0 188 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF547Q8IVP9 402 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 SFRP1Q8N474 314 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ARL14Q8N4G2 192 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 STYXQ8WUJ0 223 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 NXPE2Q96DL1 559 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 MS4A14Q96JA4 679 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 RANBP9Q96S59 729 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A7Q9HAW7 530 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A10Q9HAW8 530 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 UGT1A8Q9HAW9 530 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 CASS4Q9NQ75 786 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 NLE1Q9NVX2 485 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 LRIT1Q9P2V4 623 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 DKK4Q9UBT3 224 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 RABGEF1Q9UJ41 708 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 CRLS1Q9UJA2 301 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 RIMKLBQ9ULI2 386 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ASXL3Q9C0F0 2248 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 ASPMQ8IZT6 3477 aa15.21■□□□□ 0.03
PRPF40B-211ENST00000551063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 GOLGA6L10A0A0M3HER8 536 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 MROH6A6NGR9 719 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 PRR19A6NJB7 356 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 OR5K4A6NMS3 321 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 AP3B1O00203 1094 aa15.2■□□□□ 0.02
PRPF40B-211ENST00000551063 ZW10O43264 779 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms