RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 XYLBO75191 536 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 TM7SF2O76062 418 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 HOXB8P17481 243 aaPredicted RBP20.76■□□□□ 0.91
PRDM4-205ENST00000550376 UGT3A1Q6NUS8 523 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 OR2A12Q8NGT7 310 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 RHEBL1Q8TAI7 183 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 PHOSPHO2Q8TCD6 241 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 RNPEPL1Q9HAU8 725 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 SOCS5O75159 536 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 AARS2Q5JTZ9 985 aaKnown RBP20.76■□□□□ 0.91
PRDM4-205ENST00000550376 WASHC2DQ5SRD0 308 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 C12orf40Q86WS4 652 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 PANX3Q96QZ0 392 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 CLPBQ9H078 707 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 CRLS1Q9UJA2 301 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 BTRCQ9Y297 605 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 TIMM22Q9Y584 194 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 DNAJC15Q9Y5T4 150 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 PPARGP37231 505 aaPredicted RBP20.75■□□□□ 0.91
PRDM4-205ENST00000550376 CSNK1DP48730 415 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 NME5P56597 212 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 SCIMPQ6UWF3 145 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 KCNJ9Q92806 393 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 SCRN2Q96FV2 425 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 SLC45A3Q96JT2 553 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 BRD9Q9H8M2 597 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 ANTXRLA6NF34 631 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 PFDN6O15212 129 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 SLC25A14O95258 325 aaPredicted RBP20.75■□□□□ 0.91
PRDM4-205ENST00000550376 ESR1P03372 595 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 MSX2P35548 267 aaPredicted RBP20.75■□□□□ 0.91
PRDM4-205ENST00000550376 NUDT2P50583 147 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 ZBTB26Q9HCK0 441 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 VPS9D1Q9Y2B5 631 aa20.75■□□□□ 0.91
PRDM4-205ENST00000550376 TRPC5OSA6NMA1 111 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 GPM6BQ13491 265 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 UGT3A2Q3SY77 523 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 RIPOR1Q6ZS17 1223 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 SNX20Q7Z614 316 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 RAB44Q7Z6P3 723 aaPredicted RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 NKAPQ8N5F7 415 aaKnown RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 HIPK4Q8NE63 616 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 CEP70Q8NHQ1 597 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 SMG7Q92540 1137 aaKnown RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 MAELQ96JY0 434 aaKnown RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 CD274Q9NZQ7 290 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 OTOL1A6NHN0 477 aaPredicted RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 MTX2O75431 263 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 GUCA1CO95843 209 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 MAPK8P45983 427 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 NFKB2Q00653 900 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 CLCQ05315 142 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 DNAL1Q4LDG9 190 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 ATP13A5Q4VNC0 1218 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 TCHHL1Q5QJ38 904 aaPredicted RBP20.74■□□□□ 0.91
PRDM4-205ENST00000550376 GK5Q6ZS86 529 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 DET1Q7L5Y6 550 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 HPS6Q86YV9 775 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 SFTPA1Q8IWL2 248 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 RCN3Q96D15 328 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 PLEKHG4BQ96PX9 1271 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 CDK15Q96Q40 435 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 C1orf21Q9H246 121 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 ZNF385DQ9H6B1 395 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 B4GALT6Q9UBX8 382 aa20.74■□□□□ 0.91
PRDM4-205ENST00000550376 MAGEC1O60732 1142 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 POP4O95707 220 aaKnown RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 LINC00032P0C843 101 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ITGALP20701 1170 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 DDX6P26196 483 aaKnown RBP eCLIP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RPL26P61254 145 aaKnown RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ATP6V0D1P61421 351 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RCN1Q15293 331 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 DHCR24Q15392 516 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ARSIQ5FYB1 569 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 C1orf146Q5VVC0 180 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 NAIF1Q69YI7 327 aaPredicted RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 GPSM1Q86YR5 675 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 OR9I1Q8NGQ6 314 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 CFAP61Q8NHU2 1237 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 NPAS2Q99743 824 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 MEAF6Q9HAF1 191 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ZDHHC4Q9NPG8 344 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RPL26L1Q9UNX3 145 aaKnown RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ERVW-1Q9UQF0 538 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 CFLARO15519 480 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 LEFTY1O75610 366 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ZNF7P17097 686 aaPredicted RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 POLR2EP19388 210 aaKnown RBP20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ACRV1P26436 265 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 NRIP1P48552 1158 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RAP1GDS1P52306 607 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 CREB5Q02930 508 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ELMSAN1Q6PJG2 1045 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 TPRG1Q6ZUI0 275 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 DDIASQ8IXT1 998 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 RNF148Q8N7C7 305 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 HMGCLL1Q8TB92 370 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 SCAMP4Q969E2 229 aa20.73■□□□□ 0.91
PRDM4-205ENST00000550376 ECHDC3Q96DC8 303 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms