RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	C1orf226	A1L170	272 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	C15orf62	A8K5M9	175 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155		H0YIN7	160 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	SLC25A12	O75746	678 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	NR3C1	P04150	777 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	PRSS56	P0CW18	603 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	KRT5	P13647	590 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	EPHA8	P29322	1005 aa	Predicted RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	NR2C2	P49116	596 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	KRTAP10-12	P60413	245 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	RPL7A	P62424	266 aa	Known RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	GOLGA8DP	Q0D2H9	430 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	CDC16	Q13042	620 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	KIR2DS3	Q14952	304 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	C15orf39	Q6ZRI6	1047 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	TRPT1	Q86TN4	253 aa	Known RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	LONP2	Q86WA8	852 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	CNTROB	Q8N137	903 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	TSPYL6	Q8N831	410 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	DBF4B	Q8NFT6	615 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	PPP1R13B	Q96KQ4	1090 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	LRR1	Q96L50	414 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	STRA6	Q9BX79	667 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	SLC52A3	Q9NQ40	469 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	INTS10	Q9NVR2	710 aa	Known RBP	4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	ABI3	Q9P2A4	366 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	NOTCH3	Q9UM47	2321 aa		4.28	□□□□□ -1.72
CNOT2-222	ENST00000550155	KANSL1L	A0AUZ9	987 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	PSMD14	O00487	310 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	IPO7	O95373	1038 aa	Known RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	UBL4A	P11441	157 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	MCC	P23508	829 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	F2RL1	P55085	397 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	OLR1	P78380	273 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	CDON	Q4KMG0	1287 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	ACAD10	Q6JQN1	1059 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	PACS1	Q6VY07	963 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	RBMS3	Q6XE24	437 aa	Known RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	MYPOP	Q86VE0	399 aa	Predicted RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	EMC1	Q8N766	993 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	SGCD	Q92629	289 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	MMAB	Q96EY8	250 aa	Predicted RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	MAP7D2	Q96T17	732 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	TMEM39B	Q9GZU3	492 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	MAGIX	Q9H6Y5	334 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	TRPC7	Q9HCX4	862 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	RANGRF	Q9HD47	186 aa	Predicted RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	CWC15	Q9P013	229 aa	Known RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	CNOT8	Q9UFF9	292 aa	Known RBP	4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	PRAG1	Q86YV5	1406 aa		4.27	□□□□□ -1.73
CNOT2-222	ENST00000550155	IGKV3D-20	A0A0C4DH25	116 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	TMEM178B	H3BS89	294 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	IGLV1-44	P01699	117 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	SPARC	P09486	303 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	HOXA13	P31271	388 aa	Predicted RBP	4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	ELF1	P32519	619 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	TFAP4	Q01664	338 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	RUNX1T1	Q06455	604 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	ZNF805	Q5CZA5	627 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	LCE1F	Q5T754	118 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	ZC2HC1B	Q5TFG8	222 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	SLC5A8	Q8N695	610 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	METTL6	Q8TCB7	284 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	HM13	Q8TCT9	377 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	TAF15	Q92804	592 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	INTS12	Q96CB8	462 aa	Known RBP	4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	SMC6	Q96SB8	1091 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	PIP5K1A	Q99755	562 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	ASCL2	Q99929	193 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	RAD21L1	Q9H4I0	556 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155	COPG2	Q9UBF2	871 aa		4.26	□□□□□ -1.73
CNOT2-222	ENST00000550155		A0A0G2JNG1	304 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155		A0A1W2PP11	408 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	DUXA	A6NLW8	204 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	PAGE4	O60829	102 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	TFAP2A	P05549	437 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	KRT19	P08727	400 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	ERVK-10	P10266	1014 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	GNAZ	P19086	355 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	HOXC8	P31273	242 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	TUB	P50607	506 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	CTSC	P53634	463 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	MRPS34	P82930	218 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	MBTD1	Q05BQ5	628 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	TMEM115	Q12893	351 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	LRMP	Q12912	555 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	CSTF3	Q12996	717 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	KIR2DS5	Q14953	304 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	NAB2	Q15742	525 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	ADIPOQ	Q15848	244 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	DUOXA1	Q1HG43	343 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	LCN10	Q6JVE6	187 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	HEATR4	Q86WZ0	1026 aa		4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	APLF	Q8IW19	511 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-222	ENST00000550155	PM20D2	Q8IYS1	436 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms