RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GALNT11Q8NCW6 608 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ARRDC2Q8TBH0 407 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CCHCR1Q8TD31 782 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 KLHL6Q8WZ60 621 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 HSPH1Q92598 858 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 FCRL4Q96PJ5 515 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 OR6C1Q96RD1 312 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TDRD1Q9BXT4 1180 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 RAB33BQ9H082 229 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 HSD3B7Q9H2F3 369 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNF768Q9H5H4 540 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 HAUS4Q9H6D7 363 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 HAUS2Q9NVX0 235 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 RBM22Q9NW64 420 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNF624Q9P2J8 865 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ATXN10Q9UBB4 475 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 KLHL3Q9UH77 587 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CROTQ9UKG9 612 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TLK1Q9UKI8 766 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 SLC30A1Q9Y6M5 507 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 USP9XQ93008 2570 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 C21orf140B9A014 251 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 CHUKO15111 745 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 SPAG6O75602 509 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 RFPL1O75677 317 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 UBXN7O94888 489 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 NDUFA10O95299 355 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 MT-ND3P03897 115 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF8P17098 575 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 NR1D1P20393 614 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC19A1P41440 591 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 MAPK9P45984 424 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF165P49910 485 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 GFERP55789 205 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 DSC2Q02487 901 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 PAFAH1B3Q15102 231 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 IFI16Q16666 785 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 TXNRD3NBQ6F5E7 133 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 CAPRIN2Q6IMN6 1127 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 WASH2PQ6VEQ5 465 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 PHYKPLQ8IUZ5 450 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 SEC14L1Q92503 715 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF653Q96CK0 615 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 MLPHQ9BV36 600 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 PCDH9Q9HC56 1237 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 MLXIPLQ9NP71 852 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 WASH6PQ9NQA3 447 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 ANO10Q9NW15 660 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 PKD2L2Q9NZM6 624 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 SEMA5BQ9P283 1151 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 PLEKHB1Q9UF11 243 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 EPHA6Q9UF33 1036 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC23A2Q9UGH3 650 aa9.71□□□□□ -0.86
TRAFD1-207ENST00000550051 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 PIPSLA2A3N6 862 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 LRRC53A6NM62 1247 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 VPS4BO75351 444 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 KATNA1O75449 491 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 KIAA0754O94854 1291 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC25A14O95258 325 aaPredicted RBP9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 VIPP01282 170 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 TYRP1P17643 537 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 AMD1P17707 334 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 ARSEP51690 589 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SH3BP2P78314 561 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC25A11Q02978 314 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 NIPAL4Q0D2K0 466 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SEMA5AQ13591 1074 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 DNASE1L3Q13609 305 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 ASIC2Q16515 512 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 QPCTQ16769 361 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 FHL5Q5TD97 284 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 AGAP9Q5VTM2 703 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 CYB5D1Q6P9G0 228 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 PRSS42Q7Z5A4 293 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 RASGRP3Q8IV61 690 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 RBM12BQ8IXT5 1001 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 THAP4Q8WY91 577 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 EID2BQ96D98 161 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 STAMBPL1Q96FJ0 436 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 ZDHHC12Q96GR4 267 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 TGM7Q96PF1 710 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 ADGRE3Q9BY15 652 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 GPR87Q9BY21 358 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC40A1Q9NP59 571 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 KLC4Q9NSK0 619 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 MYO1AQ9UBC5 1043 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 IP6K2Q9UHH9 426 aa9.7□□□□□ -0.86
TRAFD1-207ENST00000550051 VPS4AQ9UN37 437 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms