RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 RAD18Q9NS91 495 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 TMEM39AQ9NV64 488 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 TMEM181Q9P2C4 612 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 DNMT3BQ9UBC3 853 aaKnown RBP8.87□□□□□ -0.99
TMEM116-209ENST00000550020 HCSTQ9UBK5 93 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 POLG2Q9UHN1 485 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 ADAMTS6Q9UKP5 1117 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 OR51B4Q9Y5P0 310 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 CPQQ9Y646 472 aa8.87□□□□□ -0.99
TMEM116-209ENST00000550020 PRSS51A0A1B0GVH4 220 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 CAPN8A6NHC0 703 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 AQP12BA6NM10 295 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 E7ENX8 843 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 GFRA2O00451 464 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 NR5A2O00482 541 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SNAP91O60641 907 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 GJB3O75712 270 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 BAIAP3O94812 1187 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ARHGEF15O94989 841 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 CKMP06732 381 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ADH1AP07327 375 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 LYNP07948 512 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PIM1P11309 404 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 FCGR1AP12314 374 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 HSD17B1P14061 328 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 DDX6P26196 483 aaKnown RBP eCLIP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PEX2P28328 305 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SLC7A1P30825 629 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SPAM1P38567 509 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SGSHP51688 502 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ERVK-8P63133 956 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 MRPS22P82650 360 aaKnown RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 DMC1Q14565 340 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ADRM1Q16186 407 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 TCTN1Q2MV58 587 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 TRIM60Q495X7 471 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ATP6AP1LQ52LC2 224 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PDCD4Q53EL6 469 aaKnown RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 LPCAT4Q643R3 524 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 LINGO4Q6UY18 593 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 RNF165Q6ZSG1 346 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 USP45Q70EL2 814 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 AQP12AQ8IXF9 295 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 KBTBD2Q8IY47 623 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 FAM9CQ8IZT9 166 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 AADATQ8N5Z0 425 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PCDH20Q8N6Y1 951 aaKnown RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SIDT2Q8NBJ9 832 aaKnown RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 FIBINQ8TAL6 211 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 DCUN1D1Q96GG9 259 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PPP3R2Q96LZ3 170 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 LBHD1Q9BQE6 289 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 CEP44Q9C0F1 390 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SEMA4BQ9NPR2 832 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ABCB8Q9NUT2 735 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 AIG1Q9NVV5 245 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ZIM2Q9NZV7 527 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 CRLS1Q9UJA2 301 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 SLC25A13Q9UJS0 675 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 LEF1Q9UJU2 399 aaPredicted RBP8.86□□□□□ -0.99
TMEM116-209ENST00000550020 PCTPQ9UKL6 214 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 AP3M1Q9Y2T2 418 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 ANGPTL3Q9Y5C1 460 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 NUP205Q92621 2012 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 DOCK4Q8N1I0 1966 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
TMEM116-209ENST00000550020 GLYATL1P3A0A0U1RQE8 302 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 C1orf232A0A0U1RR37 186 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 A0A1W2PP18 115 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 DPPA5A6NC42 116 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 CDC7O00311 574 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 SLC28A1O00337 649 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 FBP2O00757 339 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 TXNDC9O14530 226 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 KPNA5O15131 536 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 GRM6O15303 877 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 HNRNPRO43390 633 aaKnown RBP8.85□□□□□ -0.99
TMEM116-209ENST00000550020 HTRA2O43464 458 aaPredicted RBP8.85□□□□□ -0.99
TMEM116-209ENST00000550020 AP1G1O43747 822 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 NIPSNAP2O75323 286 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 SLC22A3O75751 556 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 WDR47O94967 919 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 SIX3O95343 332 aaPredicted RBP8.85□□□□□ -0.99
TMEM116-209ENST00000550020 PRAMEF1O95521 474 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 CD160O95971 181 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 GLUD1P00367 558 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 TRBC1P01850 177 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 CAPNS1P04632 268 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 CLTBP09497 229 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 LINC00032P0C843 101 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 PRR35P0CG20 571 aa8.85□□□□□ -0.99
TMEM116-209ENST00000550020 HOXB6P17509 224 aaKnown RBP8.85□□□□□ -0.99
TMEM116-209ENST00000550020 IL10P22301 178 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms