RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PANX1Q96RD7 426 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 ASF1AQ9Y294 204 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 TLL2Q9Y6L7 1015 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 RBM47A0AV96 593 aaKnown RBP14.88□□□□□ -0.03
CUX1-214ENST00000550008 MAFKO60675 156 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 HMGCS1Q01581 520 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 CACNG1Q06432 222 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 DGCR6Q14129 220 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 ZBTB6Q15916 424 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 AAGABQ6PD74 315 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 CHST9Q7L1S5 443 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 FAM47BQ8NA70 645 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 MRGPRX2Q96LB1 330 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 MARCH4Q9P2E8 410 aaPredicted RBP14.88□□□□□ -0.03
CUX1-214ENST00000550008 SRCAPQ6ZRS2 3230 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 SLC10A3P09131 477 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 PRSS56P0CW18 603 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 CD68P34810 354 aaPredicted RBP14.88□□□□□ -0.03
CUX1-214ENST00000550008 SPAM1P38567 509 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 GPR180Q86V85 440 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 FAM9CQ8IZT9 166 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 SH3RF2Q8TEC5 729 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 SCHIP1Q9P0W5 487 aaPredicted RBP14.88□□□□□ -0.03
CUX1-214ENST00000550008 F5P12259 2224 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 DPPA5A6NC42 116 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 LRRC14BA6NHZ5 514 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 GSTM1P09488 218 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 PSMB9P28065 219 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 ACTR3P61158 418 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 CYP4F2P78329 520 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 ZCCHC8Q6NZY4 707 aaKnown RBP14.88□□□□□ -0.03
CUX1-214ENST00000550008 TMC5Q6UXY8 1006 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 EID3Q8N140 333 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 LRTOMTQ8WZ04 291 aa14.88□□□□□ -0.03
CUX1-214ENST00000550008 EPN2O95208 641 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 CLDN7O95471 211 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 CYBAP13498 195 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ITGAXP20702 1163 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ALDH6A1Q02252 535 aaKnown RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 PPP1R3AQ16821 1122 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 PAQR9Q6ZVX9 377 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TRIM8Q9BZR9 551 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 KLF11O14901 512 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 FAM163BP0C2L3 166 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 GCAP28676 217 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TMEM26Q6ZUK4 368 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 CILP2Q8IUL8 1156 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ZBTB2Q8N680 514 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 SMG7Q92540 1137 aaKnown RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 C6orf203Q9P0P8 240 aaPredicted RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 ZNF229Q9UJW7 825 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ARAP2Q8WZ64 1704 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 RFXANKO14593 260 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ECI2O75521 394 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 POLR2JP52435 117 aaKnown RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 HPCAP84074 193 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 CNTN1Q12860 1018 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 KIAA0319Q5VV43 1072 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 BNIPLQ7Z465 357 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 OR9Q1Q8NGQ5 310 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 UGT2B28Q9BY64 529 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 MFSD1Q9H3U5 465 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 GABRDO14764 452 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 COCHO43405 550 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 CKMT2P17540 419 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 SERINC3Q13530 473 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TAF1AQ15573 450 aaPredicted RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 ZNF789Q5FWF6 425 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TMEM135Q86UB9 458 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 ZNF461Q8TAF7 563 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 EEF1AKMT1Q8WVE0 214 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 SLC7A6OSQ96CW6 309 aaPredicted RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 DTNBP1Q96EV8 351 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 FAM83DQ9H4H8 585 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 AKTIPQ9H8T0 292 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 THG1LQ9NWX6 298 aaKnown RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 RHBDL2Q9NX52 303 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 STK39Q9UEW8 545 aa14.87□□□□□ -0.03
CUX1-214ENST00000550008 PAIP2BQ9ULR5 123 aaKnown RBP14.87□□□□□ -0.03
CUX1-214ENST00000550008 FFAR2O15552 330 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 OR1I1O60431 355 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 GRK3P35626 688 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 IDH2P48735 452 aaKnown RBP14.86□□□□□ -0.03
CUX1-214ENST00000550008 PPP1R8Q12972 351 aaKnown RBP14.86□□□□□ -0.03
CUX1-214ENST00000550008 CERS6Q6ZMG9 384 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 Q6ZVU0 165 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 FAM124AQ86V42 546 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 CENPIQ92674 756 aaPredicted RBP14.86□□□□□ -0.03
CUX1-214ENST00000550008 AP2M1Q96CW1 435 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 LINC00854A0A1B0GVQ3 168 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 H0Y858 1186 aa14.86□□□□□ -0.03
CUX1-214ENST00000550008 SLC9A3R1O14745 358 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms