RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 RIOK2Q9BVS4 552 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 MRPL46Q9H2W6 279 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 IGSF5Q9NSI5 407 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZNF358Q9NW07 568 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 SIRPGQ9P1W8 387 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 COPG2Q9UBF2 871 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 FADS3Q9Y5Q0 445 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 OAS3Q9Y6K5 1087 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 SCN8AQ9UQD0 1980 aa13.57□□□□□ -0.24
CALCOCO1-214ENST00000549613 COL4A2P08572 1712 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 CKAP5Q14008 2032 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 MYO10Q9HD67 2058 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 QSOX1O00391 747 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 MID1O15344 667 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 NARSO43776 548 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 TOP3BO95985 862 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 MYL2P10916 166 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 BGNP21810 368 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 DRD4P21917 467 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 GRK2P25098 689 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 ALDH3A1P30838 453 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 METAP1P53582 386 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 PRKCQQ04759 706 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 CRY1Q16526 586 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 SETMARQ53H47 684 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 CTSL3PQ5NE16 218 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 PIP5KL1Q5T9C9 394 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZYG11AQ6WRX3 759 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 GANCQ8TET4 914 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZNF473Q8WTR7 871 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 BTN2A2Q8WVV5 523 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 SCAMP4Q969E2 229 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 NUS1Q96E22 293 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 CCDC126Q96EE4 140 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 GPR21Q99679 349 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 TSSK1BQ9BXA7 367 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 KLHL42Q9P2K6 505 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 ITM2BQ9Y287 266 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 NCKAP1Q9Y2A7 1128 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 DHRS7Q9Y394 339 aa13.56□□□□□ -0.24
CALCOCO1-214ENST00000549613 IGLV3-16A0A075B6K0 115 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 PLK4O00444 970 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 SPINT1O43278 529 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 MAGEC1O60732 1142 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 TRIM13O60858 407 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 MMP20O60882 483 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 ADAM23O75077 832 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 NIPSNAP2O75323 286 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 AP2A2O94973 939 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 C7P10643 843 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 C6P13671 934 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 IL9P15248 144 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 MSH3P20585 1137 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 DRD3P35462 400 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 COPAP53621 1224 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 IL2P60568 153 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 TIAL1Q01085 375 aaKnown RBP eCLIP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 DPTQ07507 201 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 DLG1Q12959 904 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 STX3Q13277 289 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 TTLL9Q3SXZ7 439 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 GKAP1Q5VSY0 366 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 KIAA1211LQ6NV74 962 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 PAQR3Q6TCH7 311 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 KBTBD6Q86V97 674 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 SYNPOQ8N3V7 929 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 AADATQ8N5Z0 425 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 DDHD1Q8NEL9 900 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 DERL2Q9GZP9 239 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 FAM107BQ9H098 131 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
CALCOCO1-214ENST00000549613 A0A1W2PQF6 199 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 G3V2L1 256 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 KPNA5O15131 536 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 GPR39O43194 453 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 EDF1O60869 148 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 DNAJC6O75061 913 aa13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 RNASEH2AO75792 299 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-214ENST00000549613 TM7SF2O76062 418 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms