RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GSTA4O15217 222 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 KLKB1P03952 638 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 RPL38P63173 70 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LIPEQ05469 1076 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LCP2Q13094 533 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 INPP5AQ14642 412 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LYSMD3Q7Z3D4 306 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CD99L2Q8TCZ2 262 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 DLG3Q92796 817 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CIPCQ9C0C6 399 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SYTL2Q9HCH5 934 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 KLQ9UEF7 1012 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 Q9Y3F1 56 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 C1orf232A0A0U1RR37 186 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 COCHO43405 550 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 MTX2O75431 263 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PRKCQQ04759 706 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 IMPG1Q17R60 797 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PARP15Q460N3 678 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 MFN1Q8IWA4 741 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PELI3Q8N2H9 469 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 SLCO4A1Q96BD0 722 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 LRRC58Q96CX6 371 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 UROC1Q96N76 676 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 BTBD9Q96Q07 612 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 RNF38Q9H0F5 515 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 EXD2Q9NVH0 621 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 B4GAT1O43505 415 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 CACNG3O60359 315 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 GMNNO75496 209 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 CYBBP04839 570 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 SMIM18P0DKX4 95 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PKMP14618 531 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 ATF6P18850 670 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 LPOP22079 712 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 FASP25445 335 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 DNAJB13P59910 316 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 DSC3Q14574 896 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PTGR1Q14914 329 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 TXNDC8Q6A555 127 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 ALG2Q9H553 416 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 ASB8Q9H765 288 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 LTB4R2Q9NPC1 389 aa13.55□□□□□ -0.24
PRPF40B-209ENST00000548825 PRSS51A0A1B0GVH4 220 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 AXIN1O15169 862 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 MAN1A2O60476 641 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 TMCC1O94876 653 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 OAZ2O95190 189 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 S100BP04271 92 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 CKMP06732 381 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 GSSP48637 474 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 HK2P52789 917 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 LAPTM4AQ15012 233 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 ARL14EPQ8N8R7 260 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 AURKBQ96GD4 344 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 TTPALQ9BTX7 342 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 CCDC90BQ9GZT6 254 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 GID8Q9NWU2 228 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 MROH6A6NGR9 719 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 ARPC2O15144 300 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 CLOCKO15516 846 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 GPX3P22352 226 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 FDXRP22570 491 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 HECTD3Q5T447 861 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 GPRIN3Q6ZVF9 776 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 STK32CQ86UX6 486 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 FUBP1Q96AE4 644 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 C1orf74Q96LT6 269 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 FARSBQ9NSD9 589 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 PFDN1O60925 122 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC22A3O75751 556 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 GSK3BP49841 420 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 TRAF2Q12933 501 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 PPP1R2P1Q96PQ5 205 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 ING2Q9H160 280 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 VPS4AQ9UN37 437 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 MYRFQ9Y2G1 1151 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 RNF11Q9Y3C5 154 aa13.54□□□□□ -0.24
PRPF40B-209ENST00000548825 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-209ENST00000548825 TMX2-CTNND1H3BSU7 103 aa13.53□□□□□ -0.24
PRPF40B-209ENST00000548825 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms