RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 A0A0G2JNG1 304 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 PIPSLA2A3N6 862 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 A6NCN8 305 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 PDZK1P1A8MUH7 402 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 MKRN2OSH3BPM6 223 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 KIR2DS3K7RE56 304 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 DNAJB5O75953 348 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 UBXN7O94888 489 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 SLC25A14O95258 325 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 NDUFA10O95299 355 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 PIRTP0C851 137 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 MYBL1P10243 752 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 SLC2A4P14672 509 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 SLC19A1P41440 591 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 CD86P42081 329 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 EPHA4P54764 986 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 SLC25A11Q02978 314 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 KIR2DS5Q14953 304 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 NFKBIBQ15653 356 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 IFI16Q16666 785 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 QPCTQ16769 361 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 ZFYVE27Q5T4F4 411 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 HENMT1Q5T8I9 393 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 NCBP2-AS2Q69YL0 99 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TIGD7Q6NT04 549 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 FAM92BQ6ZTR7 304 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TMEM26Q6ZUK4 368 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 ASB18Q6ZVZ8 466 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 PHYKPLQ8IUZ5 450 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TTC30BQ8N4P2 665 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 KCTD6Q8NC69 237 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TEKT4Q8WW24 435 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 NUP85Q9BW27 656 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TWSG1Q9GZX9 223 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 ISCUQ9H1K1 167 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 IP6K2Q9UHH9 426 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 TLK1Q9UKI8 766 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 KCTD3Q9Y597 815 aa11.79□□□□□ -0.52
TRAFD1-205ENST00000548277 SYCE3A1L190 88 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 OR5K4A6NMS3 321 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 ANKRD66B4E2M5 251 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 JCHAINP01591 159 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 PDGFAP04085 211 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 NTRK1P04629 796 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CCNYL3P0C7X3 344 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CA4P22748 312 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CCNCP24863 283 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 UQCRFS1P47985 274 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 DRG2P55039 364 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 UBE2IP63279 158 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 GALNT2Q10471 571 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 SLC10A2Q12908 348 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 DPYSL3Q14195 570 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 HADHQ16836 314 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 IRGCQ6NXR0 463 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 FAM199XQ6PEV8 388 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 ADGRG6Q86SQ4 1221 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 ATCAYQ86WG3 371 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 GPR26Q8NDV2 337 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 MAML1Q92585 1016 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 EID2BQ96D98 161 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 PSMG3-AS1Q96PY0 264 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 RUFY1Q96T51 708 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CEP41Q9BYV8 373 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CARD9Q9H257 536 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 RMI1Q9H9A7 625 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 CBX8Q9HC52 389 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 TRIM39Q9HCM9 518 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 SIDT1Q9NXL6 827 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 POLHQ9Y253 713 aa11.78□□□□□ -0.52
TRAFD1-205ENST00000548277 PIKFYVEQ9Y2I7 2098 aa11.77□□□□□ -0.52
TRAFD1-205ENST00000548277 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 LILRA5A6NI73 299 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 OR52A4PA6NMU1 304 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 TTLL8A6PVC2 850 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 MYO1FO00160 1098 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 KCNK1O00180 336 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 SPAG6O75602 509 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 CREG1O75629 220 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 MTA2O94776 668 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 TIAF1O95411 115 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 C9P02748 559 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 MMP2P08253 660 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF7P17097 686 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 GNLYP22749 145 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 CES1P23141 567 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 FANCCQ00597 558 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 GBE1Q04446 702 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 CHAF1BQ13112 559 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 PCSK7Q16549 785 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.53
TRAFD1-205ENST00000548277 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms