RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 GPR21Q99679 349 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HIST1H2AJQ99878 128 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 H2AFJQ9BTM1 129 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 NFKBIZQ9BYH8 718 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZYG11BQ9C0D3 744 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 REXO4Q9GZR2 422 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 IMPAD1Q9NX62 359 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CNOT11Q9UKZ1 510 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 POLR3HQ9Y535 204 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 SSC5DA1L4H1 1573 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 E9PAM4 449 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PLOD2O00469 737 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CNOT3O75175 753 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 MFN2O95140 757 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 STAU1O95793 577 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 GOT2P00505 430 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DBTP11182 482 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 OXCT1P55809 520 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DMPKQ09013 629 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PMS2P3Q13401 168 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PTPRCAPQ14761 206 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 AP5B1Q2VPB7 878 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SPATA19Q7Z5L4 167 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CLHC1Q8NHS4 586 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 NODALQ96S42 347 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 BBS2Q9BXC9 721 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 NDEL1Q9GZM8 345 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SCUBE2Q9NQ36 999 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 C8orf4Q9NR00 106 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 EXD2Q9NVH0 621 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TBKBP1A7MCY6 615 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF195O14628 629 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SLC7A4O43246 635 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PRKCGP05129 697 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 IL7RP16871 459 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF37AP17032 561 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 KCNA5P22460 613 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 WARSP23381 471 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ELK4P28324 431 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 GRK4P32298 578 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 HCAR3P49019 387 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SEPHS1P49903 392 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 FKBP1BP68106 108 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PDCD4Q53EL6 469 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF789Q5FWF6 425 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TECRLQ5HYJ1 363 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 BRMS1LQ5PSV4 323 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 RSBN1Q5VWQ0 802 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ARRDC4Q8NCT1 418 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 OR4K2Q8NGD2 314 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 OR10A6Q8NH74 314 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DACT3Q96B18 629 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZHX1-C8orf76Q96EF9 292 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 LINGO1Q96FE5 620 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SCLYQ96I15 445 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 SMOQ99835 787 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ABCG8Q9H221 673 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 EPS8L2Q9H6S3 715 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PLAC1Q9HBJ0 212 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CRLS1Q9UJA2 301 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 VPS28Q9UK41 221 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PSME2Q9UL46 239 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 RNF11Q9Y3C5 154 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PCDHB7Q9Y5E2 793 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 GMPPBQ9Y5P6 360 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 K7EPI3 171 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 NME4O00746 187 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 ASNA1O43681 348 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 F2P00734 622 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CD1EP15812 388 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 S100A3P33764 101 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 GGT5P36269 586 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DPP6P42658 865 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 DNAJB13P59910 316 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 UFM1P61960 85 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TRAF3Q13114 568 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TOP3AQ13472 1001 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 INAQ16352 499 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 MOGQ16653 247 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PAQR3Q6TCH7 311 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 LRRC49Q8IUZ0 686 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CHERPQ8IWX8 916 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 UTP15Q8TED0 518 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 PSMG2Q969U7 264 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 BIRC7Q96CA5 298 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 TPD52L3Q96J77 140 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 CAPNS2Q96L46 248 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 OLFM1Q99784 485 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 APOL4Q9BPW4 351 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 RERGLQ9H628 205 aa9.42□□□□□ -0.9
CALCOCO1-210ENST00000548263 RASSF1Q9NS23 344 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms