RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TMEM9Q9P0T7 183 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ATXN10Q9UBB4 475 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 TBC1D29Q9UFV1 150 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 KCNK6Q9Y257 313 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF487B1APH4 448 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 F5H423 210 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 HGSO14964 777 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 AURKAO14965 403 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 GRID2O43424 1007 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CST8O60676 142 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 DNAJC6O75061 913 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 MTX2O75431 263 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 MTA2O94776 668 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 MT-CYBP00156 380 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 LIPCP11150 499 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF8P17098 575 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC1A1P43005 524 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CYP4F2P78329 520 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 HHEXQ03014 270 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CDK18Q07002 472 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TBX2Q13207 712 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TFDP2Q14188 446 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 NR1D2Q14995 579 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CLPPQ16740 277 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TEX44Q53QW1 395 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 HENMT1Q5T8I9 393 aaKnown RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TMEM71Q6P5X7 295 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 IYDQ6PHW0 289 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CRTC3Q6UUV7 619 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC9B2Q86UD5 537 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ZC3H18Q86VM9 953 aaKnown RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 FAM129CQ86XR2 697 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 CNGA4Q8IV77 575 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SFRP1Q8N474 314 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC25A41Q8N5S1 370 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 AGBL5Q8NDL9 886 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 GPR26Q8NDV2 337 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 OR4D9Q8NGE8 314 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 OR10G6Q8NH81 332 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC37A2Q8TED4 501 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SNRNP27Q8WVK2 155 aaKnown RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TFB1MQ8WVM0 346 aaKnown RBP6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TTC9Q92623 222 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ART4Q93070 314 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 WBP1Q96G27 269 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TEKT5Q96M29 485 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 OLFM3Q96PB7 478 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TRIB3Q96RU7 358 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TRIM5Q9C035 493 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SEMA4CQ9C0C4 833 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC25A51Q9H1U9 297 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 GOLPH3Q9H4A6 298 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 OSGEPL1Q9H4B0 414 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 RMI1Q9H9A7 625 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 GLOD4Q9HC38 313 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 MAGEE1Q9HCI5 957 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TRIM39Q9HCM9 518 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 BPIFA1Q9NP55 256 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 PRDM8Q9NQV8 689 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 KLC4Q9NSK0 619 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 OCIAD1Q9NX40 245 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 SLC39A1Q9NY26 324 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 VPS18Q9P253 973 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 KLHL3Q9UH77 587 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ACSL6Q9UKU0 697 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 INTUQ9ULD6 942 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 TFR2Q9UP52 801 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF711Q9Y462 761 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 ALG6Q9Y672 507 aa6.63□□□□□ -1.35
SCAF11-211ENST00000547950 A0A0A6YYK5 440 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-211ENST00000547950 EFCAB7A8K855 629 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 DUX1O43812 170 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 NUAK1O60285 661 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 CDK14O94921 469 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 ZRANB2O95218 330 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAF11-211ENST00000547950 NDST3O95803 873 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 THRAP10827 490 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 F3P13726 295 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 PECAM1P16284 738 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-211ENST00000547950 BPIP17213 487 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 NFKB1P19838 968 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 PTPN3P26045 913 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 CSF2RBP32927 897 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 CDKN2BP42772 138 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 TNNT3P45378 269 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-211ENST00000547950 FASLGP48023 281 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 NR2C2P49116 596 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 WNT3AP56704 352 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 GPLD1P80108 840 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 ADCY2Q08462 1091 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 SQSTM1Q13501 440 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 TRA2AQ13595 282 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAF11-211ENST00000547950 TCEAL1Q15170 157 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 SPA17Q15506 151 aa6.62□□□□□ -1.35
SCAF11-211ENST00000547950 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms