RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 UGT1A8Q9HAW9 530 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 TMPRSS11EQ9UL52 423 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 KCNK6Q9Y257 313 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 PCYT1BQ9Y5K3 369 aaPredicted RBP15.53■□□□□ 0.08
CCDC78-216ENST00000544996 ENTPD2Q9Y5L3 495 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 PLXNB3Q9ULL4 1909 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 A0A1W2PQM1 296 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 OR5K4A6NMS3 321 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 SRRM3A6NNA2 597 aaPredicted RBP15.52■□□□□ 0.08
CCDC78-216ENST00000544996 TAF4O00268 1085 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 SNX2O60749 519 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 GAS8O95995 478 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 VCLP18206 1134 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 MSNP26038 577 aaKnown RBP15.52■□□□□ 0.08
CCDC78-216ENST00000544996 CXCR5P32302 372 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 FDFT1P37268 417 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 LSSP48449 732 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 CLCNKAP51800 687 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 GABREP78334 506 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 LONRF2Q1L5Z9 754 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 ZNF438Q7Z4V0 828 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 TRAPPC5Q8IUR0 188 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 SFRP1Q8N474 314 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 AVL9Q8NBF6 648 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 DDHD1Q8NEL9 900 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 TMEM74Q96NL1 305 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 STRADBQ9C0K7 418 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 OSGEPL1Q9H4B0 414 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 ASB8Q9H765 288 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 POLR1BQ9H9Y6 1135 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 HOMER3Q9NSC5 361 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 KLC4Q9NSK0 619 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 PAK5Q9P286 719 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 TBC1D29Q9UFV1 150 aa15.52■□□□□ 0.08
CCDC78-216ENST00000544996 DRG1Q9Y295 367 aaKnown RBP15.52■□□□□ 0.08
CCDC78-216ENST00000544996 GOLGA4Q13439 2230 aaKnown RBP15.52■□□□□ 0.07
CCDC78-216ENST00000544996 AKAP13Q12802 2813 aa15.52■□□□□ 0.07
CCDC78-216ENST00000544996 FRYQ5TBA9 3013 aa15.52■□□□□ 0.07
CCDC78-216ENST00000544996 TRBV23OR9-2A0A075B6M9 112 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 CASC3O15234 703 aaKnown RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 BRINP1O60477 761 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SRP72O76094 671 aaKnown RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 MPOP05164 745 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 F3P13726 295 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF7P17097 686 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 MSH3P20585 1137 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 FASLGP48023 281 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 INHBCP55103 352 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 OR1D5P58170 312 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 B4GALNT1Q00973 533 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 NR1D2Q14995 579 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SIX1Q15475 284 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 CLPPQ16740 277 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 AMZ1Q400G9 498 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 KHDC1Q4VXA5 237 aaKnown RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 GPRC6AQ5T6X5 926 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 DRICH1Q6PGQ1 229 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-216ENST00000544996 IYDQ6PHW0 289 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 GSTA5Q7RTV2 222 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 DNAAF3Q8N9W5 541 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SLC37A2Q8TED4 501 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SH3KBP1Q96B97 665 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SLC38A3Q99624 504 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 TIMM29Q9BSF4 260 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 ETNK1Q9HBU6 452 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 RAB6BQ9NRW1 208 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 SMOXQ9NWM0 555 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 FKBPLQ9UIM3 349 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 RAXQ9Y2V3 346 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 KCTD3Q9Y597 815 aa15.51■□□□□ 0.07
CCDC78-216ENST00000544996 KIR2DS5A0A0G2JLQ3 304 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 A0A0G2JNG1 304 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 KIR2DS3K7RE56 304 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 GAPDHSO14556 408 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PPM1DO15297 605 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 B4GAT1O43505 415 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 LDB2O43679 373 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 KCNJ13O60928 360 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 CPNE6O95741 557 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 RALBP11234 206 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 TPH1P17752 444 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ITGALP20701 1170 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 RBMS1P29558 406 aaKnown RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 AKT1P31749 480 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PPM1FP49593 454 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF140P52738 457 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 TMPRSS15P98073 1019 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 HHEXQ03014 270 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 CDH17Q12864 832 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 EIF3IQ13347 325 aaKnown RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 NFATC2Q13469 925 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 SEPT6Q14141 434 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 POU6F1Q14863 301 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 KIR2DS5Q14953 304 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PLA2G4EQ3MJ16 856 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 MAP9Q49MG5 647 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 C3orf38Q5JPI3 329 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 C4orf22Q6V702 233 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms