RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 THAP10Q9P2Z0 257 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ZFP69BQ9UJL9 534 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 KPNA3O00505 521 aaPredicted RBP19.64■□□□□ 0.73
COPS7A-218ENST00000543939 KERAO60938 352 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 TPBGLP0DKB5 382 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 MTHFD2P13995 350 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 MPSTP25325 297 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 MMP12P39900 470 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 DCDC1P59894 354 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 IL2P60568 153 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 PRKAA1Q13131 559 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 ELAVL3Q14576 367 aaKnown RBP19.64■□□□□ 0.73
COPS7A-218ENST00000543939 CLNKQ7Z7G1 428 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 CLDN19Q8N6F1 224 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 STAG3L4Q8TBR4 150 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 DTX3LQ8TDB6 740 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 FAM129BQ96TA1 746 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 EBF4Q9BQW3 602 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 NFKBIL1Q9UBC1 381 aaPredicted RBP19.64■□□□□ 0.73
COPS7A-218ENST00000543939 MTCH2Q9Y6C9 303 aa19.64■□□□□ 0.73
COPS7A-218ENST00000543939 IGLV3-16A0A075B6K0 115 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 CCDC189A1A4V9 331 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 SMIM24O75264 130 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 FSBPO95073 299 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 SNUPNO95149 360 aaKnown RBP19.63■□□□□ 0.73
COPS7A-218ENST00000543939 IMPDH1P20839 514 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 ITGB7P26010 798 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 GRIA2P42262 883 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 IL12RB1P42701 662 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 METAP1P53582 386 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 ZBTB16Q05516 673 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 COL19A1Q14993 1142 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 CFAP157Q5JU67 520 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 CPNE9Q8IYJ1 553 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 PIP4K2CQ8TBX8 421 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 LKAAEAR1Q8TD35 194 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 EEF1AKMT1Q8WVE0 214 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 ARRDC3Q96B67 414 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 PHF21BQ96EK2 531 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 L3HYPDHQ96EM0 354 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 LINGO1Q96FE5 620 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 PDLIM5Q96HC4 596 aaKnown RBP19.63■□□□□ 0.73
COPS7A-218ENST00000543939 FAM83DQ9H4H8 585 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 SARS2Q9NP81 518 aaKnown RBP19.63■□□□□ 0.73
COPS7A-218ENST00000543939 RAD18Q9NS91 495 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 CD84Q9UIB8 345 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 TMPRSS11EQ9UL52 423 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.63■□□□□ 0.73
COPS7A-218ENST00000543939 LRRK1Q38SD2 2015 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 TICRRQ7Z2Z1 1910 aa19.63■□□□□ 0.73
COPS7A-218ENST00000543939 ANTXRLA6NF34 631 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 CDC7O00311 574 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 NSG1P42857 185 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 IDH3AP50213 366 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 RPL14P50914 215 aaKnown RBP19.62■□□□□ 0.73
COPS7A-218ENST00000543939 HK2P52789 917 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 TUBB3Q13509 450 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 PREPLQ4J6C6 727 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-218ENST00000543939 ERAP2Q6P179 960 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 Q6ZVL8 140 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 MTSS1LQ765P7 747 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 ALYREFQ86V81 257 aaKnown RBP19.62■□□□□ 0.73
COPS7A-218ENST00000543939 NAT14Q8WUY8 206 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 INPP5DQ92835 1189 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 COPS8Q99627 209 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 SMOXQ9NWM0 555 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 ZDHHC2Q9UIJ5 367 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 RGSL1A5PLK6 1076 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 NPEPPSL1A6NEC2 478 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 UBXN8O00124 270 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 APODP05090 189 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 B4GALNT1Q00973 533 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 TSNQ15631 228 aaKnown RBP19.62■□□□□ 0.73
COPS7A-218ENST00000543939 ZNF678Q5SXM1 525 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 LIPIQ6XZB0 460 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 TECPR1Q7Z6L1 1165 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 SUSD6Q92537 303 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 EXT2Q93063 718 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 FUBP1Q96AE4 644 aaKnown RBP19.62■□□□□ 0.73
COPS7A-218ENST00000543939 SPATA16Q9BXB7 569 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 EPS15L1Q9UBC2 864 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 PRDM4Q9UKN5 801 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 RNF112Q9ULX5 631 aa19.62■□□□□ 0.73
COPS7A-218ENST00000543939 MYO1CO00159 1063 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 MATN2O00339 956 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 BTN3A1O00481 513 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 FCHO1O14526 889 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 SPINT1O43278 529 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 SLC25A14O95258 325 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-218ENST00000543939 ETV3P41162 512 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 LIG3P49916 1009 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 NCALDP61601 193 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 GRIN2CQ14957 1233 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 HENMT1Q5T8I9 393 aaKnown RBP19.61■□□□□ 0.73
COPS7A-218ENST00000543939 EGFLAMQ63HQ2 1017 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 FAM91A1Q658Y4 838 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 EPGNQ6UW88 154 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 FRMD7Q6ZUT3 714 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 SMRP1Q8NCR6 262 aa19.61■□□□□ 0.73
COPS7A-218ENST00000543939 SCAMP4Q969E2 229 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms