RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SLC39A1Q9NY26 324 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SAE1Q9UBE0 346 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 RSPH14Q9UHP6 348 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 KCNK6Q9Y257 313 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 AAR2Q9Y312 384 aaKnown RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 OAS3Q9Y6K5 1087 aaKnown RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CCDC66A2RUB6 948 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PMS2P1A4D2B8 440 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 GOLGA6L9A6NEM1 432 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 C2orf81A6NN90 581 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 EFCAB7A8K855 629 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PDZK1P1A8MUH7 402 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 FADS2P1A8MWK0 482 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 GOLGA6L6A8MZA4 724 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 STMND1H3BQB6 276 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 STX7O15400 261 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 PPFIA2O75334 1257 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 NDUFA10O95299 355 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 LCA5LO95447 670 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 SFTPCP11686 197 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CCL4P13236 92 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ZNF8P17098 575 aaPredicted RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 BPIP17213 487 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 NFKB1P19838 968 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 HLA-DPA1P20036 260 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 MPSTP25325 297 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 HMGCLP35914 325 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 SPAM1P38567 509 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ETV5P41161 510 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 EPHA4P54764 986 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 WNT3AP56704 352 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 RWDD2BP57060 319 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 RAB15P59190 212 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 DCDC1P59894 354 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PDE1BQ01064 536 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ITGA9Q13797 1035 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 IHHQ14623 411 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 C16orf72Q14CZ0 275 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PRKD1Q15139 912 aaPredicted RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 TGIF1Q15583 401 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PPP2R5EQ16537 467 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 LDLRAP1Q5SW96 308 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 C11orf63Q6NUN7 778 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CYB5D1Q6P9G0 228 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 DARS2Q6PI48 645 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 CRTC3Q6UUV7 619 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CEACAM20Q6UY09 585 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 GLT6D1Q7Z4J2 308 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ADGRG6Q86SQ4 1221 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 KIAA1328Q86T90 577 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ZFAND4Q86XD8 727 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 ZNF567Q8N184 647 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 BLOC1S5Q8TDH9 187 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PTCD2Q8WV60 388 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 SNRNP27Q8WVK2 155 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 CXorf40BQ96DE9 158 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 SGF29Q96ES7 293 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PPP1R2P1Q96PQ5 205 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 TEFMQ96QE5 360 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 VPS35Q96QK1 796 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 PANX2Q96RD6 677 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 FCRL5Q96RD9 977 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 TRIB3Q96RU7 358 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 NUDT22Q9BRQ3 303 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ZPBPQ9BS86 351 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 EFHD1Q9BUP0 239 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 HEMGNQ9BXL5 484 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 TRIT1Q9H3H1 467 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 ARFGAP3Q9NP61 516 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CPNE7Q9UBL6 633 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 TBC1D29Q9UFV1 150 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 CNOT6Q9ULM6 557 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 PCDHA3Q9Y5H8 950 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 ST14Q9Y5Y6 855 aa7.07□□□□□ -1.28
NUP43-206ENST00000543637 DNMT3AQ9Y6K1 912 aaPredicted RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 ZNF106Q9H2Y7 1883 aaKnown RBP7.07□□□□□ -1.28
NUP43-206ENST00000543637 hCG_1818297A0A087WSY0 165 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 GLYATL1P3A0A0U1RQE8 302 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 MACROD2A1Z1Q3 448 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 C9orf172C9J069 976 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 APOC4-APOC2K7ER74 178 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 CHUKO15111 745 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 CAPN5O15484 640 aaPredicted RBP7.06□□□□□ -1.28
NUP43-206ENST00000543637 EFSO43281 561 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 TJP3O95049 919 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 CRTAMO95727 393 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 APOC2P02655 101 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 PRB1P04280 392 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 THRAP10827 490 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 FGF3P11487 239 aaPredicted RBP7.06□□□□□ -1.28
NUP43-206ENST00000543637 MSH3P20585 1137 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 LPOP22079 712 aaPredicted RBP7.06□□□□□ -1.28
NUP43-206ENST00000543637 MAP4P27816 1152 aaKnown RBP7.06□□□□□ -1.28
NUP43-206ENST00000543637 EIF3EP60228 445 aaKnown RBP7.06□□□□□ -1.28
NUP43-206ENST00000543637 LY6DQ14210 128 aa7.06□□□□□ -1.28
NUP43-206ENST00000543637 SLC1A5Q15758 541 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms