RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PACSIN2Q9UNF0 486 aaPredicted RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 OR51B4Q9Y5P0 310 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 STON1Q9Y6Q2 735 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 CHD8Q9HCK8 2581 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 TECTAO75443 2155 aa5.15□□□□□ -1.59
CLIP1-217ENST00000543205 TPRP12270 2363 aaKnown RBP5.15□□□□□ -1.59
CLIP1-217ENST00000543205 GOLGA6L9A6NEM1 432 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZSCAN5CA6NGD5 496 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 C3orf70A6NLC5 250 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 AQP12BA6NM10 295 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TTC34A8MYJ7 566 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF487B1APH4 448 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 WASH3PC4AMC7 463 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SGK1O00141 431 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 APOL1O14791 398 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KDELR3O43731 214 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KIF5CO60282 957 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KDM1AO60341 852 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KRT37O76014 449 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ALDH1A2O94788 518 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 GLDCP23378 1020 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 MSNP26038 577 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 IL12RB1P42701 662 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CDKN2BP42772 138 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 MARCKSL1P49006 195 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 STK19P49842 368 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 DNA2P51530 1060 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 DGKEP52429 567 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 DYNLT1P63172 113 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SATB1Q01826 763 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SLC20A2Q08357 652 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TFDP2Q14188 446 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 RPS6KA1Q15418 735 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 MMEL1Q495T6 779 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 GLIPR1L2Q4G1C9 344 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TFDP3Q5H9I0 405 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 MFSD7Q6UXD7 560 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 LINGO4Q6UY18 593 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 REXO1L1PQ8IX06 675 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 NPWQ8N729 165 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ATP11CQ8NB49 1132 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KDM1BQ8NB78 822 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TSTD1Q8NFU3 115 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZUFSPQ96AP4 578 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 FAF2Q96CS3 445 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ERLEC1Q96DZ1 483 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 RCC1LQ96I51 464 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 RNF157Q96PX1 679 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 GABRG3Q99928 467 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ACE2Q9BYF1 805 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SLC39A8Q9C0K1 460 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 BTBD1Q9H0C5 482 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 QRSL1Q9H0R6 528 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 LRRC19Q9H756 370 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 LRRC4CQ9HCJ2 640 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ETNK2Q9NVF9 386 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ARGLU1Q9NWB6 273 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SLCO3A1Q9UIG8 710 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 PYCARDQ9ULZ3 195 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 EDARQ9UNE0 448 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 GPR55Q9Y2T6 319 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 F5P12259 2224 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CFAP54Q96N23 3096 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 EDDM13A0A1B0GTR0 161 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CXorf51AA0A1B0GTR3 108 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TCRBV21S2A2A0A5A6 115 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 F5H0A9 414 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CLEC3AO75596 197 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 BAG2O95816 211 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SCG5P05408 212 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 KRT10P13645 584 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 HLA-EP13747 358 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 PRKCHP24723 683 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 PEX5P50542 639 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CASP6P55212 293 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CSTF1Q05048 431 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 AP1B1Q10567 949 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ENPP2Q13822 863 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 PAFAH1B3Q15102 231 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 DLG2Q15700 870 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 CRY1Q16526 586 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 TSTQ16762 297 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF569Q5MCW4 686 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SFRP5Q5T4F7 317 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SEL1L2Q5TEA6 688 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 AFMIDQ63HM1 303 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 NCBP2-AS2Q69YL0 99 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 LEKR1Q6ZMV7 388 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 BZW1Q7L1Q6 419 aaKnown RBP5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZDHHC13Q8IUH4 622 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 EPHX4Q8IUS5 362 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 LRRC49Q8IUZ0 686 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 SH2D3CQ8N5H7 860 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ATPAF2Q8N5M1 289 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 PQLC3Q8N755 202 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF366Q8N895 744 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 NETO2Q8NC67 525 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 NSMCE1Q8WV22 266 aa5.14□□□□□ -1.59
CLIP1-217ENST00000543205 ALG3Q92685 438 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms