RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	ZNF140	P52738	457 aa	Predicted RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ILK	Q13418	452 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	BIRC2	Q13490	618 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	CCDC38	Q502W7	563 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	CERCAM	Q5T4B2	595 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ADGRG6	Q86SQ4	1221 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	NRROS	Q86YC3	692 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ZNF398	Q8TD17	642 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ZDHHC1	Q8WTX9	485 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	SCARF2	Q96GP6	870 aa	Predicted RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	DNAJC1	Q96KC8	554 aa	Known RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	VPS35	Q96QK1	796 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ASB8	Q9H765	288 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	RMI1	Q9H9A7	625 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	SPATS2L	Q9NUQ6	558 aa	Known RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	APPL1	Q9UKG1	709 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ZZEF1	O43149	2961 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	PKD1L2	Q7Z442	2459 aa		19.42	■□□□□ 0.7
ARF3-208	ENST00000541959	LDB2	O43679	373 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	NUAK1	O60285	661 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	SUN1	O94901	812 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	CDK14	O94921	469 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	AKT1	P31749	480 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	HADHA	P40939	763 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	GPS1	Q13098	491 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	MSLN	Q13421	630 aa	Predicted RBP	19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	SFTPA2	Q8IWL1	248 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	MAPK15	Q8TD08	544 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	ABCG4	Q9H172	646 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	CRLS1	Q9UJA2	301 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	TMPRSS11E	Q9UL52	423 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	KCNK6	Q9Y257	313 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	SAR1B	Q9Y6B6	198 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	SLC30A1	Q9Y6M5	507 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	FREM2	Q5SZK8	3169 aa		19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	URB1	O60287	2271 aa	Known RBP	19.41	■□□□□ 0.7
ARF3-208	ENST00000541959	CHD6	Q8TD26	2715 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	GAPDHS	O14556	408 aa	Predicted RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	VEGFD	O43915	354 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	SNX2	O60749	519 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	SRP72	O76094	671 aa	Known RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	JUP	P14923	745 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	ITGAL	P20701	1170 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	MC4R	P32245	332 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	SESN2	P58004	480 aa	Predicted RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	E2F1	Q01094	437 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	TMEM115	Q12893	351 aa	Predicted RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	CAMK2B	Q13554	666 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	PEX6	Q13608	980 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	INSC	Q1MX18	579 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	KHDC1	Q4VXA5	237 aa	Known RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	ZRANB3	Q5FWF4	1079 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	PERM1	Q5SV97	790 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	LDLRAP1	Q5SW96	308 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	GPRC6A	Q5T6X5	926 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	HES3	Q5TGS1	186 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	LRRTM4	Q86VH4	590 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	TRAPPC5	Q8IUR0	188 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	GRK7	Q8WTQ7	553 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	NAT6	Q93015	286 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	ZCCHC2	Q9C0B9	1178 aa	Known RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	OSGEPL1	Q9H4B0	414 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	FAM96A	Q9H5X1	160 aa		19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	ZFC3H1	O60293	1989 aa	Known RBP	19.4	■□□□□ 0.7
ARF3-208	ENST00000541959	ZNF106	Q9H2Y7	1883 aa	Known RBP	19.39	■□□□□ 0.7
ARF3-208	ENST00000541959	EME2	A4GXA9	379 aa	Predicted RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	TRABD2B	A6NFA1	517 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	MSH3	P20585	1137 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	CA5A	P35218	305 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	MAZ	P56270	477 aa	Known RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	LRP8	Q14114	963 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	CYP1B1	Q16678	543 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	C14orf28	Q4W4Y0	310 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	PAPD7	Q5XG87	772 aa	Known RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	GPR156	Q8NFN8	814 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	STYX	Q8WUJ0	223 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	CCDC74A	Q96AQ1	378 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	CCDC86	Q9H6F5	360 aa	Known RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	CASS4	Q9NQ75	786 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	EIF2B3	Q9NR50	452 aa	Known RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	KLC4	Q9NSK0	619 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	NLE1	Q9NVX2	485 aa	Predicted RBP	19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	DNAJC16	Q9Y2G8	782 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	ST14	Q9Y5Y6	855 aa		19.39	■□□□□ 0.69
ARF3-208	ENST00000541959	TRBV23OR9-2	A0A075B6M9	112 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	HEATR9	A2RTY3	570 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	TAF4	O00268	1085 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	KMO	O15229	486 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	NOBOX	O60393	691 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	CASQ1	P31415	396 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	FNTA	P49354	379 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	XIAP	P98170	497 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	NFATC2	Q13469	925 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	PPP1R7	Q15435	360 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	OGFOD3	Q6PK18	319 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	MICALCL	Q6ZW33	695 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	DET1	Q7L5Y6	550 aa		19.38	■□□□□ 0.69
ARF3-208	ENST00000541959	TAS2R42	Q7RTR8	314 aa		19.38	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms