RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF311Q5JNZ3 666 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 RNASEH2BQ5TBB1 312 aaKnown RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 CLIP4Q8N3C7 705 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 OTUB2Q96DC9 234 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 GIN1Q9NXP7 522 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 OR12D3Q9UGF7 316 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 MXD1Q05195 221 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 CAPN13Q6MZZ7 669 aaPredicted RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 HMBOX1Q6NT76 420 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 MSRAQ9UJ68 235 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 A0A0J9YYE9 177 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF878C9JN71 531 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 RARAP10276 462 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 IGFBP4P22692 258 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 GDI2P50395 445 aaKnown RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 RPL6Q02878 288 aaKnown RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 NAE1Q13564 534 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 USP30Q70CQ3 517 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 TATDN2Q93075 761 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 ARHGEF4Q9NR80 690 aa15.27■□□□□ 0.03
HMGA2-210ENST00000541363 RCOR3Q9P2K3 495 aaPredicted RBP15.27■□□□□ 0.03
HMGA2-210ENST00000541363 KDELR1P24390 212 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CARTPTQ16568 116 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 ARSKQ6UWY0 536 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 KLHL15Q96M94 604 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 DMRTB1Q96MA1 342 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 FAM189A2Q15884 450 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 UBAP2Q5T6F2 1119 aaKnown RBP15.26■□□□□ 0.03
HMGA2-210ENST00000541363 RAVER1Q8IY67 606 aaKnown RBP15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CPNE2Q96FN4 548 aaPredicted RBP15.26■□□□□ 0.03
HMGA2-210ENST00000541363 NPAS2Q99743 824 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 SNTG1Q9NSN8 517 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CLUHO75153 1309 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 ANGPTL1O95841 491 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 IGKV5-2P06315 115 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 HSD11B1P28845 292 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 ACSL1P33121 698 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CHKAP35790 457 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 PRR5P85299 388 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 KLHL22Q53GT1 634 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 BEND4Q6ZU67 534 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 FBXO33Q7Z6M2 555 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 TRPM4Q8TD43 1214 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 L2HGDHQ9H9P8 463 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 C11orf16Q9NQ32 467 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 MDFIC2A0A1B0GVS7 189 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 H3BQF6 201 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 HDAC3O15379 428 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 UBXN7O94888 489 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 TACSTD2P09758 323 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 PSEN1P49768 467 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 EML3Q32P44 896 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 ZDHHC20Q5W0Z9 365 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 IQSEC1Q6DN90 963 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 OR4L1Q8NH43 312 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 C15orf40Q8WUR7 153 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 GATAD2BQ8WXI9 593 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 PGM2Q96G03 612 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CCDC120Q96HB5 630 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 DEFB129Q9H1M3 183 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 TMPRSS4Q9NRS4 437 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 PDPK1O15530 556 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 POLR2JP52435 117 aaKnown RBP15.26■□□□□ 0.03
HMGA2-210ENST00000541363 AHSA2Q719I0 299 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 SLC44A3Q8N4M1 653 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 HIF3AQ9Y2N7 669 aa15.26■□□□□ 0.03
HMGA2-210ENST00000541363 CLCN7P51798 805 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 CRADDP78560 199 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 LDLRAP1Q5SW96 308 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 TMEM121BQ9BXQ6 578 aaPredicted RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 MAP4K5Q9Y4K4 846 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 PCDHGB2Q9Y5G2 931 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 TMEM94Q12767 1356 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 RPLP0P05388 317 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 AQP1P29972 269 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 AIMP2Q13155 320 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 LAPTM5Q13571 262 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 P2RY8Q86VZ1 359 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 SLC38A4Q969I6 547 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF570Q96NI8 536 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 IMP3Q9NV31 184 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 LYARQ9NX58 379 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF226Q9NYT6 803 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 CSDE1O75534 798 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 GRK1Q15835 563 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 CD300LFQ8TDQ1 290 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 GPATCH1Q9BRR8 931 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 SLC22A4Q9H015 551 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 DHX15O43143 795 aaKnown RBP15.25■□□□□ 0.03
HMGA2-210ENST00000541363 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
HMGA2-210ENST00000541363 ZFP3Q96NJ6 502 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms