RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 HOXD9P28356 352 aaPredicted RBP12.43□□□□□ -0.42
RNF4-222ENST00000541204 APLP1P51693 650 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 INPP5AQ14642 412 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 FBXO48Q5FWF7 155 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 INTS11Q5TA45 600 aaKnown RBP12.43□□□□□ -0.42
RNF4-222ENST00000541204 IRAK1BP1Q5VVH5 260 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 MFSD2AQ8NA29 543 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 ISOC1Q96CN7 298 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 TUBGCP3Q96CW5 907 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 CINPQ9BW66 212 aaPredicted RBP12.43□□□□□ -0.42
RNF4-222ENST00000541204 MRPL9Q9BYD2 267 aaKnown RBP12.43□□□□□ -0.42
RNF4-222ENST00000541204 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 TUBB1Q9H4B7 451 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 DNAAF2Q9NVR5 837 aaKnown RBP12.43□□□□□ -0.42
RNF4-222ENST00000541204 PCDHGC4Q9Y5F7 938 aa12.43□□□□□ -0.42
RNF4-222ENST00000541204 A0A087WXM4 84 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 AQP12BA6NM10 295 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 AZIN1O14977 448 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 MTHFD1P11586 935 aaKnown RBP12.42□□□□□ -0.42
RNF4-222ENST00000541204 IL10P22301 178 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 SLC6A2P23975 617 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 FASP25445 335 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 CA8P35219 290 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 YBEYP58557 167 aaPredicted RBP12.42□□□□□ -0.42
RNF4-222ENST00000541204 ESRRGP62508 458 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 NFKB2Q00653 900 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 OR4D1Q15615 310 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 HECTD3Q5T447 861 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 ZNF549Q6P9A3 640 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 IFNEQ86WN2 208 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 AQP12AQ8IXF9 295 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 CRIPAKQ8N1N5 446 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 MINDY1Q8N5J2 469 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 TRPC4APQ8TEL6 797 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 CYGBQ8WWM9 190 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 LRRC58Q96CX6 371 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 FBXL20Q96IG2 436 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 BIRC8Q96P09 236 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 TRIM15Q9C019 465 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 CDC14AQ9UNH5 594 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 UBA6A0AVT1 1052 aaPredicted RBP12.42□□□□□ -0.42
RNF4-222ENST00000541204 TMX2-CTNND1H3BSU7 103 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 ARPC2O15144 300 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 PAPSS2O95340 614 aaPredicted RBP12.42□□□□□ -0.42
RNF4-222ENST00000541204 GLP2RO95838 553 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 HGFP14210 728 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 MYF6P23409 242 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 OXCT1P55809 520 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 TIAL1Q01085 375 aaKnown RBP eCLIP12.42□□□□□ -0.42
RNF4-222ENST00000541204 KCTD21Q4G0X4 260 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 DOCK4Q8N1I0 1966 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 C12orf43Q96C57 262 aaKnown RBP12.42□□□□□ -0.42
RNF4-222ENST00000541204 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 PDFQ9HBH1 243 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 ACTR3BQ9P1U1 418 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 SPO11Q9Y5K1 396 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
RNF4-222ENST00000541204 H3BMM5 538 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
RNF4-222ENST00000541204 HOXA2O43364 376 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 FKTNO75072 461 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 RHOCP08134 193 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 HSD17B1P14061 328 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 SLC26A3P40879 764 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 CCT8P50990 548 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 ECT2LQ008S8 904 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 RPS6KA2Q15349 733 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 SLC36A3Q495N2 470 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 LCN8Q6JVE9 175 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 ADGRG5Q8IZF4 528 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 PACRGLQ8N7B6 248 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 DNAJB14Q8TBM8 379 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 MYRFLQ96LU7 910 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 RNF208Q9H0X6 261 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
RNF4-222ENST00000541204 POLG2Q9UHN1 485 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 FAF1Q9UNN5 650 aaPredicted RBP12.41□□□□□ -0.42
RNF4-222ENST00000541204 PLXNA3P51805 1871 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 INPP4BO15327 924 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 FOXD2O60548 495 aaPredicted RBP12.41□□□□□ -0.42
RNF4-222ENST00000541204 SNAP91O60641 907 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 STC2O76061 302 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 FGF4P08620 206 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 MTHFD2P13995 350 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 NCK1P16333 377 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 FDXRP22570 491 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 ENTPD1P49961 510 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
RNF4-222ENST00000541204 DIO3P55073 304 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 CYP51A1Q16850 503 aa12.41□□□□□ -0.42
RNF4-222ENST00000541204 ZBED5Q49AG3 693 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms