RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 GOLGA6L10A0A0M3HER8 536 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 A0A1W2PQM1 296 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 AGRPO00253 132 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 ECEL1O95672 775 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 AP2A1O95782 977 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 EPOP01588 193 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 TPH1P17752 444 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PAFAH1B1P43034 410 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 TNNT3P45378 269 aaPredicted RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 GPS1Q13098 491 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 SEMA5AQ13591 1074 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
LTBR-209ENST00000541102 PRPSAP1Q14558 356 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PTPRCAPQ14761 206 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PYCR3Q53H96 274 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 ZNF648Q5T619 568 aaPredicted RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 HENMT1Q5T8I9 393 aaKnown RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 ANKRD22Q5VYY1 191 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 CCNJLQ8IV13 435 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 GPR26Q8NDV2 337 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 SPATA4Q8NEY3 305 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PATE1Q8WXA2 126 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 KRT12Q99456 494 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 TRIM51Q9BSJ1 452 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 FSD1LQ9BXM9 530 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 FOXP3Q9BZS1 431 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 EPB41L5Q9HCM4 733 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 BPIFA1Q9NP55 256 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 ARFGAP3Q9NP61 516 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PAK5Q9P286 719 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 RNF14Q9UBS8 474 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 PCYOX1Q9UHG3 505 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 ATXN7L1Q9ULK2 861 aaPredicted RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 AAR2Q9Y312 384 aaKnown RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 KCTD3Q9Y597 815 aa14.09□□□□□ -0.15
LTBR-209ENST00000541102 OAS3Q9Y6K5 1087 aaKnown RBP14.09□□□□□ -0.15
LTBR-209ENST00000541102 ZZEF1O43149 2961 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 FAM208BQ5VWN6 2430 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 A0A1W2PNU3 283 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 PMS2P1A4D2B8 440 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 RHPN2P1A8MT19 583 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 NTN3O00634 580 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 RRP8O43159 456 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 BUD23O43709 281 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 ZNF189O75820 626 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 ITPKBP27987 946 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 RBMS1P29558 406 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 ALDH4A1P30038 563 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 FDFT1P37268 417 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 EIF2S3P41091 472 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 TBC1D25Q3MII6 688 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 AMZ1Q400G9 498 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 LRRC69Q6ZNQ3 347 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 CHST15Q7LFX5 561 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 ZNF572Q7Z3I7 529 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 TMC3Q7Z5M5 1100 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 B3GNT8Q7Z7M8 397 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 LSMEM2Q8N112 164 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 ARL14Q8N4G2 192 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 TTC30BQ8N4P2 665 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 OR52K1Q8NGK4 314 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 GRAMD1AQ96CP6 724 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 SRPK1Q96SB4 655 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 APPL1Q9UKG1 709 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 MRFAP1Q9Y605 127 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 DSPP15924 2871 aaKnown RBP14.08□□□□□ -0.16
LTBR-209ENST00000541102 KIF26BQ2KJY2 2108 aa14.08□□□□□ -0.16
LTBR-209ENST00000541102 A0A087WV48 116 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 D6RAR5 112 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 TTI1O43156 1089 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 B4GAT1O43505 415 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 NUDT21O43809 227 aaKnown RBP14.07□□□□□ -0.16
LTBR-209ENST00000541102 DNAJC6O75061 913 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 SUN1O94901 812 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 SLC25A14O95258 325 aaPredicted RBP14.07□□□□□ -0.16
LTBR-209ENST00000541102 APRTP07741 180 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 PNLIPP16233 465 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 BPIP17213 487 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 HLA-DPA1P20036 260 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 IVDP26440 423 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 PDX1P52945 283 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 OR1D5P58170 312 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 BASP1P80723 227 aaKnown RBP14.07□□□□□ -0.16
LTBR-209ENST00000541102 PEX6Q13608 980 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 KCNJ11Q14654 390 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 USP53Q70EK8 1073 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 SPRED1Q7Z699 444 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 JAMLQ86YT9 394 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 NAGSQ8N159 534 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 BLOC1S5Q8TDH9 187 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 CPT1BQ92523 772 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 SLCO2A1Q92959 643 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 NAF1Q96HR8 494 aaKnown RBP14.07□□□□□ -0.16
LTBR-209ENST00000541102 ZNF578Q96N58 590 aaPredicted RBP14.07□□□□□ -0.16
LTBR-209ENST00000541102 OR2AG1Q9H205 316 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 LRRC40Q9H9A6 602 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 ARNT2Q9HBZ2 717 aa14.07□□□□□ -0.16
LTBR-209ENST00000541102 RAD18Q9NS91 495 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms