RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TDRD1Q9BXT4 1180 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MAF1Q9H063 256 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 KCNH4Q9UQ05 1017 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MED16Q9Y2X0 877 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TRIM64CA6NLI5 447 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 A8MU76 341 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 BTN3A1O00481 513 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 RHOBTB1O94844 696 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 F2P00734 622 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 C1QCP02747 245 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALBP02768 609 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 HTR1AP08908 422 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CTU2Q2VPK5 515 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GRAMD4Q6IC98 578 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TLK2Q86UE8 772 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 IGFN1Q86VF2 1251 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FBXO39Q8N4B4 442 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FNDC5Q8NAU1 212 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 DDHD1Q8NEL9 900 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPR21Q99679 349 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCDC90BQ9GZT6 254 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC25A51Q9H1U9 297 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TOR3AQ9H497 397 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 IKZF5Q9H5V7 419 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.28□□□□□ -0.768e-7■■□□□ 12.8
CDC42SE1-207ENST00000540998 ZNHIT2Q9UHR6 403 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 PCDHGA8Q9Y5G5 932 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 PPP2R3BQ9Y5P8 575 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 UPK1AO00322 258 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 PSMD3O43242 534 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 NIPSNAP2O75323 286 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 INMTO95050 263 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FDXRP22570 491 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CD97P48960 835 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 EFEMP1Q12805 493 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GLYATQ6IB77 296 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 HACD2Q6Y1H2 254 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALDH16A1Q8IZ83 802 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SIDT2Q8NBJ9 832 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 BORCS5Q969J3 196 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TSPAN17Q96FV3 270 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MYOCQ99972 504 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 HOPXQ9BPY8 73 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 NEURL2Q9BR09 285 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALOXE3Q9BYJ1 711 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CATSPERBQ9H7T0 1116 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAM105AQ9NUU6 356 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SPO11Q9Y5K1 396 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SCN4AP35499 1836 aa10.27□□□□□ -0.76
CDC42SE1-207ENST00000540998 A0A1W2PP18 115 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 MBLAC1A4D2B0 266 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 MYADML2A6NDP7 307 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 XPNPEP2O43895 674 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 SERPINB7O75635 380 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CAPN15O75808 1086 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 IGLV3-25P01717 112 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CNPP09543 421 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCNA2P20248 432 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 LHX1P48742 406 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 HK3P52790 923 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PLA2G16P53816 162 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 ADARB1P78563 741 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 DPY19L1Q2PZI1 675 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF829Q3KNS6 432 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 GTDC1Q4AE62 458 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 KLHDC8BQ8IXV7 354 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PSD4Q8NDX1 1056 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CLHC1Q8NHS4 586 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABCG8Q9H221 673 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 GID8Q9NWU2 228 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PKD2L2Q9NZM6 624 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDH7Q9ULB5 785 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PLXNB2O15031 1838 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM247A6NEH6 219 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 MROH6A6NGR9 719 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 RRN3P2A6NIE6 340 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 DFNA5O60443 496 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 B4GALT3O60512 393 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 GLP2RO95838 553 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 CYP4B1P13584 511 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 POLR2JP52435 117 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 PHEXP78562 749 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 DNASE1L3Q13609 305 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 MAPK11Q15759 364 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 KIAA0408Q6ZU52 694 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 MILR1Q7Z6M3 343 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR13F1Q8NGS4 319 aa10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-207ENST00000540998 ARRDC2Q8TBH0 407 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms