RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PRSS42Q7Z5A4 293 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 RASGRP3Q8IV61 690 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 NIPA2Q8N8Q9 360 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 ISCUQ9H1K1 167 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 ATXN10Q9UBB4 475 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 PADI1Q9ULC6 663 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 LRRC53A6NM62 1247 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 C21orf140B9A014 251 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 DDX3XO00571 662 aaKnown RBP eCLIP26.42■■□□□ 1.821e-6■□□□□ 8.4
CHFR-218ENST00000540963 KIAA0754O94854 1291 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 VIPP01282 170 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 AMD1P17707 334 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 CCNCP24863 283 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 ARRDC2Q8TBH0 407 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 FAM71BQ8TC56 605 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 KLHL6Q8WZ60 621 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 TSGA13Q96PP4 275 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 TRIM39Q9HCM9 518 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 MYO1AQ9UBC5 1043 aa26.42■■□□□ 1.82
CHFR-218ENST00000540963 PLEKHB1Q9UF11 243 aaPredicted RBP26.42■■□□□ 1.82
CHFR-218ENST00000540963 KATNA1O75449 491 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 MTA2O94776 668 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 ZNF8P17098 575 aaPredicted RBP26.41■■□□□ 1.82
CHFR-218ENST00000540963 IL4RP24394 825 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 PAFAH1B3Q15102 231 aaKnown RBP26.41■■□□□ 1.82
CHFR-218ENST00000540963 IFI16Q16666 785 aaKnown RBP26.41■■□□□ 1.82
CHFR-218ENST00000540963 CCDC122Q5T0U0 273 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 CCDC183Q5T5S1 534 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 FHL5Q5TD97 284 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 CAPRIN2Q6IMN6 1127 aaKnown RBP26.41■■□□□ 1.82
CHFR-218ENST00000540963 TRIM48Q8IWZ4 208 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 RBM12BQ8IXT5 1001 aaKnown RBP26.41■■□□□ 1.82
CHFR-218ENST00000540963 EFCAB3Q8N7B9 438 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 LPCAT1Q8NF37 534 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 TGM7Q96PF1 710 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 FCRL4Q96PJ5 515 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 TWSG1Q9GZX9 223 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 RAB33BQ9H082 229 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 KLC4Q9NSK0 619 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 POT1Q9NUX5 634 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 RBM22Q9NW64 420 aaKnown RBP eCLIP26.41■■□□□ 1.82
CHFR-218ENST00000540963 EPHA6Q9UF33 1036 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 SLC30A1Q9Y6M5 507 aa26.41■■□□□ 1.82
CHFR-218ENST00000540963 CDC14CA4D256 554 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 ANKRD66B4E2M5 251 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 CHUKO15111 745 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 SPAG6O75602 509 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 AGFG2O95081 481 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 TYRP1P17643 537 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 SLC19A1P41440 591 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 SH3BP2P78314 561 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 SLC25A11Q02978 314 aaKnown RBP26.4■■□□□ 1.82
CHFR-218ENST00000540963 TYRO3Q06418 890 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 SEMA5AQ13591 1074 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 DNASE1L3Q13609 305 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 TXNRD3NBQ6F5E7 133 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 PPP1R3BQ86XI6 285 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 MLPHQ9BV36 600 aaPredicted RBP26.4■■□□□ 1.82
CHFR-218ENST00000540963 OSGEPL1Q9H4B0 414 aa26.4■■□□□ 1.82
CHFR-218ENST00000540963 ZNF624Q9P2J8 865 aaPredicted RBP26.4■■□□□ 1.82
CHFR-218ENST00000540963 PIPSLA2A3N6 862 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 MFSD11O43934 449 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 CAPZBP47756 277 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 SEPHS1P49903 392 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 DCDC1P59894 354 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 KRT81Q14533 505 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 PDPK2PQ6A1A2 396 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 ABRAXAS1Q6UWZ7 409 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 WASH2PQ6VEQ5 465 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 THAP4Q8WY91 577 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 ZDHHC12Q96GR4 267 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 ZSCAN5AQ9BUG6 496 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 BRD8Q9H0E9 1235 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 LHX9Q9NQ69 397 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 WASH6PQ9NQA3 447 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 RAD18Q9NS91 495 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 SCHIP1Q9P0W5 487 aaPredicted RBP26.39■■□□□ 1.82
CHFR-218ENST00000540963 NFKBIL1Q9UBC1 381 aaPredicted RBP26.39■■□□□ 1.82
CHFR-218ENST00000540963 IP6K2Q9UHH9 426 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 LNPEPQ9UIQ6 1025 aa26.39■■□□□ 1.82
CHFR-218ENST00000540963 MYO9AB2RTY4 2548 aa26.39■■□□□ 1.81
CHFR-218ENST00000540963 TTLL8A6PVC2 850 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 RASSF9O75901 435 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 SLC25A14O95258 325 aaPredicted RBP26.38■■□□□ 1.81
CHFR-218ENST00000540963 CASP14P31944 242 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 LEPRP48357 1165 aaKnown RBP26.38■■□□□ 1.81
CHFR-218ENST00000540963 KLHL30Q0D2K2 578 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 QPCTQ16769 361 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 ZNF569Q5MCW4 686 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 BPHLQ86WA6 291 aaPredicted RBP26.38■■□□□ 1.81
CHFR-218ENST00000540963 TIMM29Q9BSF4 260 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 ADGRE3Q9BY15 652 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 GPR87Q9BY21 358 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 OR2AG1Q9H205 316 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 CUEDC1Q9NWM3 386 aaPredicted RBP26.38■■□□□ 1.81
CHFR-218ENST00000540963 SEMA5BQ9P283 1151 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 TTLL3Q9Y4R7 772 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 ESPL1Q14674 2120 aa26.38■■□□□ 1.81
CHFR-218ENST00000540963 KMOO15229 486 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 NELFEP18615 380 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms