RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 TBC1D3BA6NDS4 549 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 KPNA3O00505 521 aaPredicted RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 UBFD1O14562 309 aaKnown RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 GRID2O43424 1007 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 MTX2O75431 263 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 ECI2O75521 394 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 DCTN3O75935 186 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 IPO13O94829 963 aaKnown RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 RPS3P23396 243 aaKnown RBP eCLIP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 TARSP26639 723 aaKnown RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 MMP12P39900 470 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 WASP42768 502 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 ST8SIA6P61647 398 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 KHDC1Q4VXA5 237 aaKnown RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 KIF2BQ8N4N8 673 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 CPA6Q8N4T0 437 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 ELSPBP1Q96BH3 223 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 CACNA2D2Q9NY47 1150 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 MTCH2Q9Y6C9 303 aa12.15□□□□□ -0.46
AP003559.1-201ENST00000540906 FADS2P1A8MWK0 482 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PPP6CO00743 305 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 FSBPO95073 299 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 KAT7O95251 611 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CD1EP15812 388 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CD9P21926 228 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CERS6Q6ZMG9 384 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PIWIL4Q7Z3Z4 852 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CCDC91Q7Z6B0 441 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 YAF2Q8IY57 180 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 RBFAQ8N0V3 343 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PTGR2Q8N8N7 351 aaPredicted RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 KDM1BQ8NB78 822 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 KIAA1191Q96A73 305 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 FUBP1Q96AE4 644 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PPP1R36Q96LQ0 422 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 NSUN5Q96P11 429 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 C19orf43Q9BQ61 176 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 TFB2MQ9H5Q4 396 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 COG4Q9H9E3 785 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 DKK3Q9UBP4 350 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 HAO1Q9UJM8 370 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PPM1HQ9ULR3 514 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 COQ6Q9Y2Z9 468 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 RAP2CQ9Y3L5 183 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ANKRD12Q6UB98 2062 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 A0A1B0GTL3 188 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 EDDM13A0A1B0GTR0 161 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 BTN3A1O00481 513 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 NPHS1O60500 1241 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 SLC25A14O95258 325 aaPredicted RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 TRIM16O95361 564 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ZNF7P17097 686 aaPredicted RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 IGFBP4P22692 258 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 POLR2LP62875 67 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 UBAP2LQ14157 1087 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 SETDB1Q15047 1291 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 EIF4HQ15056 248 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ACSBG2Q5FVE4 666 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ZNF678Q5SXM1 525 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PTRHD1Q6GMV3 140 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 EPGNQ6UW88 154 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 LIPIQ6XZB0 460 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 TECPR1Q7Z6L1 1165 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 PLEKHG4BQ96PX9 1271 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 CLPBQ9H078 707 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 DHRS7Q9Y394 339 aa12.14□□□□□ -0.47
AP003559.1-201ENST00000540906 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 A0A1W2PQ67 120 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SUPT3HB4E1H0 165 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 E5RI56 91 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 MATN2O00339 956 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms