RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PCDHA3Q9Y5H8 950 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 DNMT3AQ9Y6K1 912 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 LAMA5O15230 3695 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 IGSF10Q6WRI0 2623 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 ATRXP46100 2492 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 ZFC3H1O60293 1989 aaKnown RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 hCG_1818297A0A087WSY0 165 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 IGHV1OR21-1A0A087WYE8 117 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 LOC285095A0A1B0GVY8 99 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 C5orf60A6NFR6 353 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 B4E171 279 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 F8W8V4 182 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 TOX3O15405 576 aaPredicted RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 NRDCO43847 1150 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 DNAJC6O75061 913 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 CDK14O94921 469 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 CRTAMO95727 393 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 GAS8O95995 478 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 RALBP11234 206 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 IDSP22304 550 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 AK4P27144 223 aaPredicted RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 SPAM1P38567 509 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 TSPAN7P41732 249 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 ZNF75DP51815 510 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 PDX1P52945 283 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 MAZP56270 477 aaKnown RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 WNT3AP56704 352 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 OR1D5P58170 312 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 LAMB3Q13751 1172 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 DCAF12Q5T6F0 453 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 ZNF449Q6P9G9 518 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 IYDQ6PHW0 289 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 WASH2PQ6VEQ5 465 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 KDELC2Q7Z4H8 507 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 GLT6D1Q7Z4J2 308 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 ZC3H18Q86VM9 953 aaKnown RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 PELI3Q8N2H9 469 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 CCL4L1Q8NHW4 92 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 BAG1Q99933 345 aaPredicted RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 TSGA10Q9BZW7 698 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 OR2AG1Q9H205 316 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 TRIT1Q9H3H1 467 aaKnown RBP10.27□□□□□ -0.77
CDCA3-208ENST00000540683 OSGEPL1Q9H4B0 414 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 WASH6PQ9NQA3 447 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 AMFRQ9UKV5 643 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 SHOC2Q9UQ13 582 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 PCDHGA3Q9Y5H0 932 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 PTPRQQ9UMZ3 2332 aa10.27□□□□□ -0.77
CDCA3-208ENST00000540683 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 LILRA5A6NI73 299 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 K7ENP7 123 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CHUKO15111 745 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 STX7O15400 261 aaKnown RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 PSMD3O43242 534 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 B4GAT1O43505 415 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 VIPP01282 170 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 SLC4A1P02730 911 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ATP1A1P05023 1023 aaKnown RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ITGB2P05107 769 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ACP5P13686 325 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 XRCC1P18887 633 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 NFKB1P19838 968 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CD1CP29017 333 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 HADHAP40939 763 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 VAV2P52735 878 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 NOMO1Q15155 1222 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 SLC1A5Q15758 541 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 LONRF2Q1L5Z9 754 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 P3H1Q32P28 736 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 SOWAHCQ53LP3 525 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 MANEAQ5SRI9 462 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 INO80CQ6PI98 192 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 NPNTQ6UXI9 565 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CEACAM20Q6UY09 585 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 PEX26Q7Z412 305 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 B3GNT8Q7Z7M8 397 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 SLC37A2Q8TED4 501 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ULK4Q96C45 1275 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 PRR11Q96HE9 360 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 ALS2CR12Q96Q35 445 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 FRMD8P1Q9BZ68 369 aaPredicted RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 OSBPL8Q9BZF1 889 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 GBA3Q9H227 469 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 VPS37BQ9H9H4 285 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 POT1Q9NUX5 634 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CPNE7Q9UBL6 633 aa10.26□□□□□ -0.77
CDCA3-208ENST00000540683 CNOT6Q9ULM6 557 aaKnown RBP10.26□□□□□ -0.77
CDCA3-208ENST00000540683 IGHV5-10-1A0A0J9YXX1 117 aa10.25□□□□□ -0.77
CDCA3-208ENST00000540683 GLYATL1P3A0A0U1RQE8 302 aa10.25□□□□□ -0.77
CDCA3-208ENST00000540683 PDZK1P1A8MUH7 402 aa10.25□□□□□ -0.77
CDCA3-208ENST00000540683 FADS2P1A8MWK0 482 aa10.25□□□□□ -0.77
CDCA3-208ENST00000540683 SNX2O60749 519 aa10.25□□□□□ -0.77
CDCA3-208ENST00000540683 MT-CYBP00156 380 aaPredicted RBP10.25□□□□□ -0.77
CDCA3-208ENST00000540683 FUCA1P04066 466 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms