RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NOBOXO60393 691 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 EPB42P16452 691 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 OGNP20774 298 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CHERPQ8IWX8 916 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PIK3R3Q92569 461 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 NPLQ9BXD5 320 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 EHD1Q9H4M9 534 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PIGVQ9NUD9 493 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 MAPRE3Q9UPY8 281 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 H3BMQ9 156 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 GHRHRQ02643 423 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PMS2P3Q13401 168 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PAN2Q504Q3 1202 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 TTC23LQ6PF05 361 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CASP12Q6UXS9 341 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 DNAJB8Q8NHS0 232 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PPTC7Q8NI37 304 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 FAR1Q8WVX9 515 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 COG8Q96MW5 612 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 FTHL17Q9BXU8 183 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 NUDT4Q9NZJ9 180 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 HPRP00739 348 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CYP11A1P05108 521 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SMIM18P0DKX4 95 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 ARSFP54793 590 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PWP1Q13610 501 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 DDX39BQ13838 428 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 LCN8Q6JVE9 175 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 MZT2BQ6NZ67 158 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 LBX2Q6XYB7 198 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SYT12Q8IV01 421 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SELENOMQ8WWX9 145 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 TFAP2CQ92754 450 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 MRPL42Q9Y6G3 142 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PRORSD1PA6NEY8 169 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 F8W810 466 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CLIC3O95833 236 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 MBL2P11226 248 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PFKPQ01813 784 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SYPL2Q5VXT5 272 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 ERICH5Q6P6B1 374 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 LDB1Q86U70 411 aaPredicted RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SMG8Q8ND04 991 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CDK5RAP1Q96SZ6 601 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 RPF2Q9H7B2 306 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 PCDH12Q9NPG4 1184 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
DNMT1-203ENST00000540357 SPASTQ9UBP0 616 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 FAM220BPB1ANY3 271 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 MYL12BO14950 172 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 HSD17B1P14061 328 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 PAX3P23760 479 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 GNPDA1P46926 289 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 PPP1R3AQ16821 1122 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 R3HCC1LQ7Z5L2 792 aaKnown RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 RAB43Q86YS6 212 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 OMA1Q96E52 524 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 TBATAQ96M53 351 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SNX8Q9Y5X2 465 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 EFCAB9A8MZ26 197 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 CBX4O00257 560 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 COX7A2P14406 83 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 PCSK2P16519 638 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ITGA2P17301 1181 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ARPC4P59998 168 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 COPZ1P61923 177 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 TUBA1BP68363 451 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 CYP4F3Q08477 520 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 CARM1Q86X55 608 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 NSMCE3Q96MG7 304 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 NPY6RQ99463 290 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 WDR83Q9BRX9 315 aaKnown RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 RFXANKO14593 260 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 FFAR3O14843 346 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 GPR42O15529 346 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 IL6P05231 212 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 RPLP2P05387 115 aaKnown RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 FABP3P05413 133 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 RHOAP61586 193 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 MFSD10Q14728 455 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 COQ5Q5HYK3 327 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SLC22A16Q86VW1 577 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 OR10A6Q8NH74 314 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 Q96MT0 163 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms