RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 A0A1B0GTQ1 180 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 GOLGA8KD6RF30 607 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 CSF2P04141 144 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 NME1P15531 152 aaKnown RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ZNF8P17098 575 aaPredicted RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 RXRGP48443 463 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PDE1BQ01064 536 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 TEAD4Q15561 434 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 HIF1AQ16665 826 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 BBS9Q3SYG4 887 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 STEAP4Q687X5 459 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ENPP7Q6UWV6 458 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 C11orf96Q7Z7L8 435 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 LDB1Q86U70 411 aaPredicted RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 NRROSQ86YC3 692 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ANKMY2Q8IV38 441 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 IQCKQ8N0W5 287 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PDIK1LQ8N165 341 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 MINDY1Q8N5J2 469 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 RASGEF1AQ8N9B8 481 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 OR56A4Q8NGH8 313 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PEX13Q92968 403 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 WDR92Q96MX6 357 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ELF4Q99607 663 aaPredicted RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ASB8Q9H765 288 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 RAD18Q9NS91 495 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 PRKAB1Q9Y478 270 aa12.86□□□□□ -0.35
CCDC42-202ENST00000539522 RIF1Q5UIP0 2472 aaKnown RBP12.86□□□□□ -0.35
CCDC42-202ENST00000539522 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PRSS38A1L453 326 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 CHUKO15111 745 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SDC3O75056 442 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 USP1O94782 785 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 HSD17B3P37058 310 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PLA2G5P39877 138 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 HADHAP40939 763 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 MAGEA4P43358 317 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 CTSCP53634 463 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 C21orf59P57076 290 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SRP54P61011 504 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 CRYMQ14894 314 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DBN1Q16643 649 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SKIDA1Q1XH10 827 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 ZNF789Q5FWF6 425 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 ZDHHC20Q5W0Z9 365 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 KIAA0930Q6ICG6 404 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 TRMT10BQ6PF06 316 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DOK6Q6PKX4 331 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 UNC5AQ6ZN44 842 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 NLRP9Q7RTR0 991 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PARGQ86W56 976 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DCP2Q8IU60 420 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 STAMBPL1Q96FJ0 436 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 GTPBP2Q9BX10 602 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 NUSAP1Q9BXS6 441 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PHPT1Q9NRX4 125 aaPredicted RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DNAAF2Q9NVR5 837 aaKnown RBP12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SLC17A6Q9P2U8 582 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SLC23A2Q9UGH3 650 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 APPL1Q9UKG1 709 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 SUFUQ9UMX1 484 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 PRSS21Q9Y6M0 314 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 RPS6KL1Q9Y6S9 549 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 DGKBQ9Y6T7 804 aa12.85□□□□□ -0.35
CCDC42-202ENST00000539522 ASCC3Q8N3C0 2202 aaKnown RBP12.84□□□□□ -0.35
CCDC42-202ENST00000539522 FAM186AA6NE01 2351 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 CACNB4O00305 520 aaPredicted RBP12.84□□□□□ -0.35
CCDC42-202ENST00000539522 TNFRSF10CO14798 259 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 NUAK1O60285 661 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 OR1I1O60431 355 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 PIAS2O75928 621 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 SLC25A14O95258 325 aaPredicted RBP12.84□□□□□ -0.35
CCDC42-202ENST00000539522 VAPBO95292 243 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 TTC4O95801 387 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 IVLP07476 585 aa12.84□□□□□ -0.35
CCDC42-202ENST00000539522 CD59P13987 128 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms