RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 AGBL5Q8NDL9 886 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 CCDC112Q8NEF3 446 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 SH3KBP1Q96B97 665 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.94■■□□□ 1.1
SCARB1-206ENST00000539320 KIR2DS5A0A0G2JLQ3 304 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 A0A0G2JNG1 304 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 KIR2DS3K7RE56 304 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 MPSTP25325 297 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 CSTF2P33240 577 aaKnown RBP eCLIP21.93■■□□□ 1.1
SCARB1-206ENST00000539320 TNNT3P45378 269 aaPredicted RBP21.93■■□□□ 1.1
SCARB1-206ENST00000539320 CLCNKAP51800 687 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 KIR2DS5Q14953 304 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 ADGRG6Q86SQ4 1221 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 AVL9Q8NBF6 648 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 KRT35Q92764 455 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 PLEKHG4BQ96PX9 1271 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 VAT1Q99536 393 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 OSGEPL1Q9H4B0 414 aa21.93■■□□□ 1.1
SCARB1-206ENST00000539320 OR5K4A6NMS3 321 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 HACD1B0YJ81 288 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 F5H423 210 aaPredicted RBP21.92■■□□□ 1.1
SCARB1-206ENST00000539320 AURKAO14965 403 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 EPHA4P54764 986 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 SRSF6Q13247 344 aaKnown RBP21.92■■□□□ 1.1
SCARB1-206ENST00000539320 NOMO1Q15155 1222 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 INSCQ1MX18 579 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 PLA2G4EQ3MJ16 856 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 MANEAQ5SRI9 462 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 BBS12Q6ZW61 710 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 DAAM2Q86T65 1068 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 ZNF567Q8N184 647 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 HTR3CQ8WXA8 447 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 OXNAD1Q96HP4 312 aaPredicted RBP21.92■■□□□ 1.1
SCARB1-206ENST00000539320 FCRL5Q96RD9 977 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 TAAR9Q96RI9 348 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 TRABDQ9H4I3 376 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 KLC4Q9NSK0 619 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 PCDHB11Q9Y5F2 797 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 PCDHGA3Q9Y5H0 932 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 SDK2Q58EX2 2172 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 KALRNO60229 2985 aa21.92■■□□□ 1.1
SCARB1-206ENST00000539320 LOC285095A0A1B0GVY8 99 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.91■■□□□ 1.1
SCARB1-206ENST00000539320 CHUKO15111 745 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 EFSO43281 561 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 VEGFDO43915 354 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 MTX2O75431 263 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 FGF3P11487 239 aaPredicted RBP21.91■■□□□ 1.1
SCARB1-206ENST00000539320 CHRNA4P43681 627 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 ZNF75DP51815 510 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 PID1Q7Z2X4 250 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 VASH2Q86V25 355 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 LRRTM4Q86VH4 590 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 DTX1Q86Y01 620 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 ZNF843Q8N446 348 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 TTC30BQ8N4P2 665 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 IPMKQ8NFU5 416 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 PMEPA1Q969W9 287 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 MRGPRX2Q96LB1 330 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 VPS35Q96QK1 796 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 PANX2Q96RD6 677 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 TIMM29Q9BSF4 260 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 BPIFA1Q9NP55 256 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 PRDM8Q9NQV8 689 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 PDP2Q9P2J9 529 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 CPNE7Q9UBL6 633 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 ZNF462Q96JM2 2506 aa21.91■■□□□ 1.1
SCARB1-206ENST00000539320 ATMQ13315 3056 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 LILRA5A6NI73 299 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 SOWAHDA6NJG2 315 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 STMND1H3BQB6 276 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 APOC4-APOC2K7ER74 178 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 IPO7O95373 1038 aaKnown RBP21.9■■□□□ 1.1
SCARB1-206ENST00000539320 EPOP01588 193 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 APOC2P02655 101 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 HLA-DPA1P20036 260 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 CTNNA1P35221 906 aaKnown RBP21.9■■□□□ 1.1
SCARB1-206ENST00000539320 HMGCLP35914 325 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 MAPK9P45984 424 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 UBE2IP63279 158 aaKnown RBP21.9■■□□□ 1.1
SCARB1-206ENST00000539320 MPP3Q13368 585 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 KHDC1Q4VXA5 237 aaKnown RBP21.9■■□□□ 1.1
SCARB1-206ENST00000539320 SIRPB2Q5JXA9 342 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 FAM129CQ86XR2 697 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 SLC25A41Q8N5S1 370 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 ART4Q93070 314 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 MRFAP1L1Q96HT8 127 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 DDA1Q9BW61 102 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 HEMGNQ9BXL5 484 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.9■■□□□ 1.1
SCARB1-206ENST00000539320 EPB41L1Q9H4G0 881 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 HACD3Q9P035 362 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 RSPH14Q9UHP6 348 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 SPTA1P02549 2419 aa21.9■■□□□ 1.1
SCARB1-206ENST00000539320 HELZ2Q9BYK8 2649 aaKnown RBP21.89■■□□□ 1.09
SCARB1-206ENST00000539320 B4E171 279 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 KMOO15229 486 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 CDK14O94921 469 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 NDUFA10O95299 355 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 ZNF7P17097 686 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms