RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZCCHC4Q9H5U6 513 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ESRP2Q9H6T0 727 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 C17orf75Q9HAS0 396 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SEBOXQ9HB31 216 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ADARB2Q9NS39 739 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 IRAK4Q9NWZ3 460 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SMARCAL1Q9NZC9 954 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FBXL17Q9UF56 701 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TINAGQ9UJW2 476 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GRID1Q9ULK0 1009 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TRAV24A0A0B4J272 114 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 A0A1B0GVM2 712 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LNP1A1A4G5 178 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 OR2A25A4D2G3 310 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C5orf60A6NFR6 353 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 B4DLN1 442 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 E9PMD0 336 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 H0YAE9 185 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SGK494L7N484 410 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NDUFS4O43181 175 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MSI1O43347 362 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ANP32CO43423 234 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CBX6O95503 412 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 FTCDO95954 541 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 P4HA1P13674 534 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GCFC2P16383 781 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SRD5A1P18405 259 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CYP3A5P20815 502 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ADSSP30520 456 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PIP4K2AP48426 406 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 VPS41P49754 854 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MLLT10P55197 1068 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ARF5P84085 180 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 BNC1Q01954 994 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SCN1BQ07699 218 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 EFNB3Q15768 340 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF628Q5EBL2 1059 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CEP78Q5JTW2 689 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C1orf189Q5VU69 101 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TRIM65Q6PJ69 517 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DHRS13Q6UX07 377 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CCBE1Q6UXH8 406 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 LDLRAD3Q86YD5 345 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 UNC45BQ8IWX7 931 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ANKRD13CQ8N6S4 541 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TERB1Q8NA31 727 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 COLGALT1Q8NBJ5 622 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SCCPDHQ8NBX0 429 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GOLGA5Q8TBA6 731 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PROKR1Q8TCW9 393 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SEPT1Q8WYJ6 367 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SMARCE1Q969G3 411 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SLCO4A1Q96BD0 722 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DHX58Q96C10 678 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 RHBDF1Q96CC6 855 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ARHGEF26Q96DR7 871 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 RMDN2Q96LZ7 410 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TSGA13Q96PP4 275 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GAD1Q99259 594 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM47Q9BQJ4 181 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NEURL2Q9BR09 285 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 POLR3CQ9BUI4 534 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PIGMQ9H3S5 423 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 UBTD1Q9HAC8 227 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 POLD4Q9HCU8 107 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SLC6A13Q9NSD5 602 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SMPD4Q9NXE4 827 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ALKBH4Q9NXW9 302 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CCNL1Q9UK58 526 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 KIAA1217Q5T5P2 1943 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 A0A087X1B8 175 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM8BA6NDV4 472 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 C5orf52A6NGY3 159 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 H0Y626 953 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 H0YIN7 160 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TSPAN1O60635 241 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TGDSO95455 350 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HSPA4LO95757 839 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 G6PDP11413 515 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MMP9P14780 707 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 NDUFB7P17568 137 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TNFRSF1BP20333 461 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HOXA11P31270 313 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 DCTDP32321 178 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MC5RP33032 325 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 SHMT1P34896 483 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HSD17B3P37058 310 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 EIF2DP41214 584 aaKnown RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PRKCIP41743 596 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CD86P42081 329 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 HOXA1P49639 335 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CLCN5P51795 746 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 ARSFP54793 590 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CLDN15P56746 228 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 GOLGA8DPQ0D2H9 430 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 CDC16Q13042 620 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 TRAF1Q13077 416 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 MESDQ14696 234 aa1.05□□□□□ -2.24
HIF1A-204ENST00000539097 PFKFB3Q16875 520 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-204ENST00000539097 RUNDC3AQ59EK9 446 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms