RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 AFAP1Q8N556 730 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SIRT6Q8N6T7 355 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 PI4KAP1Q8N8J0 262 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 NCOA7Q8NI08 942 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 BRSK1Q8TDC3 778 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 GDPD5Q8WTR4 605 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CLEC4CQ8WTT0 213 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SLC13A3Q8WWT9 602 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ZNF606Q8WXB4 792 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 PSPC1Q8WXF1 523 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 NPIPB3Q92617 1050 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SGCDQ92629 289 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CASP10Q92851 521 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TUBGCP3Q96CW5 907 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ARHGEF26Q96DR7 871 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 DAZAP1Q96EP5 407 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 STAMBPL1Q96FJ0 436 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ERO1AQ96HE7 468 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CLMNQ96JQ2 1002 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 RMDN2Q96LZ7 410 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TMEM68Q96MH6 324 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CAMK1GQ96NX5 476 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 NEK1Q96PY6 1258 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CDRT15Q96T59 188 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TXN2Q99757 166 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 MACROD1Q9BQ69 325 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 PAAF1Q9BRP4 392 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 THUMPD2Q9BTF0 503 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 MLPHQ9BV36 600 aaPredicted RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CARD6Q9BX69 1037 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CACNG6Q9BXT2 260 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 RTN4RQ9BZR6 473 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 DDX47Q9H0S4 455 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 GOLPH3LQ9H4A5 285 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TASP1Q9H6P5 420 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 DNAJC18Q9H819 358 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CHMP1AQ9HD42 196 aaPredicted RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 PIH1D3Q9NQM4 214 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 RXFP3Q9NSD7 469 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 IARS2Q9NSE4 1012 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SLC35D1Q9NTN3 355 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TXLNGQ9NUQ3 528 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ZNHIT6Q9NWK9 470 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 HAO2Q9NYQ3 351 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 VPS51Q9UID3 782 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CD207Q9UJ71 328 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 LEF1Q9UJU2 399 aaPredicted RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 GMEB2Q9UKD1 530 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CDH7Q9ULB5 785 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 MTUS1Q9ULD2 1270 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 RIMKLBQ9ULI2 386 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 ADAMTS5Q9UNA0 930 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SH2B3Q9UQQ2 575 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SSX2IPQ9Y2D8 614 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 RPH3AQ9Y2J0 694 aaPredicted RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 TDRKHQ9Y2W6 561 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 CMAHPQ9Y471 501 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 PCDHGA1Q9Y5H4 931 aa1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.78□□□□□ -2.12
NPIPB4-209ENST00000538859 COL15A1P39059 1388 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 NPHP3Q7Z494 1330 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 LOC105369274A0A096LPK9 316 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 GPR75-ASB3A0A0A6YYF3 556 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 ARPC4-TTLL3A0A0A6YYG9 625 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 LOC102723532A0A0G2JNH3 316 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 C13orf42A0A1B0GVH6 325 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 DENND3A2RUS2 1198 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 OR6C68A6NDL8 312 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 TMEM247A6NEH6 219 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 NPIPB13A6NJU9 1138 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 C2orf81A6NN90 581 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 NPIPB5A8MRT5 1133 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 CDRT15L2A8MXV6 281 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 NPIPB4C9JG80 1138 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 FAM86B1E9PN63 330 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 UBE2Q2LH0YL09 131 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 H3BNX3 289 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 K7EPI3 171 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 AGPSO00116 658 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 AP3B1O00203 1094 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 CACNB4O00305 520 aaPredicted RBP1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 NTN3O00634 580 aaPredicted RBP1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 E2F3O00716 465 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 LDLRAD4O15165 306 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 SMAD9O15198 467 aaKnown RBP1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 TEX28O15482 410 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 SSX5O60225 188 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 KLHL41O60662 606 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 ZC3H11AO75152 810 aaKnown RBP eCLIP1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 ATP2C2O75185 946 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 USP12O75317 370 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 OR2C1O95371 312 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 GCNT3O95395 438 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 VNN1O95497 513 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 OPN1MWP04001 364 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 HIST1H2ABP04908 130 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 CSF1RP07333 972 aa1.77□□□□□ -2.13
NPIPB4-209ENST00000538859 TUBBP07437 444 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms