RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SOCS5O75159 536 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 SLC25A14O95258 325 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-205ENST00000538545 RB1P06400 928 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 C1SP09871 688 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 ADH5P11766 374 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 IMPDH1P20839 514 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 RAD51Q06609 339 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PPP2R2DQ66LE6 453 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 EP400NLQ6ZTU2 488 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PBXIP1Q96AQ6 731 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 ECHDC3Q96DC8 303 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■□□□□ 10.1
ACTN1-205ENST00000538545 TBC1D14Q9P2M4 693 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 NKX1-2Q9UD57 310 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-205ENST00000538545 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 C9JVG2 144 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 SDHDO14521 159 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 POP4O95707 220 aaKnown RBP13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PSMA3P25788 255 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 DNAJB13P59910 316 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 NUMA1Q14980 2115 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 MBOAT1Q6ZNC8 495 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 Q6ZVL8 140 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 MCUR1Q96AQ8 359 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PLEKHG4BQ96PX9 1271 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 HBEGFQ99075 208 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 TCF12Q99081 682 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 ZBTB26Q9HCK0 441 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 MID1IP1Q9NPA3 183 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 TMPRSS11EQ9UL52 423 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PLXNB3Q9ULL4 1909 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 NPHS1O60500 1241 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 SMIM24O75264 130 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 H2AFYO75367 372 aaKnown RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CDK14O94921 469 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ETV3P41162 512 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 PTGER3P43115 390 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 NME5P56597 212 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 HERVK_113P63132 956 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 GRIN2CQ14957 1233 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 SNCBQ16143 134 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 TANGO2Q6ICL3 276 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 GDPD4Q6W3E5 623 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 TPRG1Q6ZUI0 275 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 HSD11B1LQ7Z5J1 315 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CELF5Q8N6W0 485 aaKnown RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CNDP1Q96KN2 507 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ERVK-6Q9BXR3 956 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CLPBQ9H078 707 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ADAMTS6Q9UKP5 1117 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ZNF197O14709 1029 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 TPBGLP0DKB5 382 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 RECQLP46063 649 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 RASSF2P50749 326 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 IL2P60568 153 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 B4GALNT1Q00973 533 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 KLF10Q13118 480 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ACSBG2Q5FVE4 666 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 TCHHL1Q5QJ38 904 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 SNX20Q7Z614 316 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 AHI1Q8N157 1196 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 FBXO39Q8N4B4 442 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 PCDH20Q8N6Y1 951 aaKnown RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-205ENST00000538545 FAM161BQ96MY7 647 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 ASB16Q96NS5 453 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 DERL2Q9GZP9 239 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 SYTL2Q9HCH5 934 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 CDYLQ9Y232 598 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
ACTN1-205ENST00000538545 PDE5AO76074 875 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 AOC1P19801 751 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 ITGALP20701 1170 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 ACRV1P26436 265 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 SPAM1P38567 509 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 CSNK1DP48730 415 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 KPNB1Q14974 876 aaKnown RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 SERPINA13PQ6UXR4 307 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 USP45Q70EL2 814 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 PELI3Q8N2H9 469 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 DLG3Q92796 817 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 EIF2B4Q9UI10 523 aaKnown RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 TRAF6Q9Y4K3 522 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 SPEGQ15772 3267 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 FGF19O95750 216 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 PYGLP06737 847 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 PGM1P36871 562 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 GDF5P43026 501 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 CUL3Q13618 768 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 DUSP6Q16828 381 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms