RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 INSIG1O15503 277 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 NRP2O60462 931 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 SEC24AO95486 1093 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.26
SCARB1-205ENST00000538291 TGFBR2P37173 567 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 CAPGP40121 348 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 ELF3P78545 371 aaPredicted RBP16.71■□□□□ 0.26
SCARB1-205ENST00000538291 USP4Q13107 963 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 VITQ6UXI7 678 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 COQ7Q99807 217 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 ADGRE2Q9UHX3 823 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 CD84Q9UIB8 345 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 IQCMA0A1B0GVH7 501 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 VARSP26640 1264 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SNX20Q7Z614 316 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SAPCD2Q86UD0 394 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 PIK3C3Q8NEB9 887 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 OR7D4Q8NG98 312 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 PCED1BQ96HM7 432 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SNX27Q96L92 541 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SLC38A3Q99624 504 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 ATG10Q9H0Y0 220 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 EGFL7Q9UHF1 273 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SRRM3A6NNA2 597 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 OGNP20774 298 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 GBE1Q04446 702 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 ZNF846Q147U1 533 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 FBXO42Q6P3S6 717 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 TRABD2AQ86V40 505 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 DAW1Q8N136 415 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 GPC6Q9Y625 555 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 RCCD1A6NED2 376 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 FPGTO14772 594 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 TMCC2O75069 709 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 NDST2P52849 883 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 PYDC2Q56P42 97 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 CPSF7Q8N684 471 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 PLD5Q8N7P1 536 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 MECRQ9BV79 373 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 PCDHGC3Q9UN70 934 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 AP2A1O95782 977 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 EIF2B2P49770 351 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 AMIGO2Q86SJ2 522 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 EXOSC8Q96B26 276 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 RBM18Q96H35 190 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 TBATAQ96M53 351 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
SCARB1-205ENST00000538291 IPPKQ9H8X2 491 aa16.7■□□□□ 0.26
SCARB1-205ENST00000538291 TGDSO95455 350 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 ANXA4P09525 319 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-205ENST00000538291 VPS26BQ4G0F5 336 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CHST15Q7LFX5 561 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-205ENST00000538291 ALG3Q92685 438 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 TAPBPLQ9BX59 468 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CKLFQ9UBR5 152 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 IKZF2Q9UKS7 526 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 GPR25O00155 361 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 MATN3O15232 486 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SSNA1O43805 119 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 BMP6P22004 513 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 ARFIP1P53367 373 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 MAPK12P53778 367 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 PNLIPRP1P54315 467 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 LILRA4P59901 499 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 GRB14Q14449 540 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CADM2Q8N3J6 435 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SLC4A11Q8NBS3 891 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 PRKAB1Q9Y478 270 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SLC38A8A6NNN8 435 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 BLKP51451 505 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 MED22Q15528 200 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 UBXN11Q5T124 520 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 GCNT6Q5T4J0 391 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 PPP2R2DQ66LE6 453 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 TAC4Q86UU9 113 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 TBC1D21Q8IYX1 336 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CLCC1Q96S66 551 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CHRAC1Q9NRG0 131 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 RASSF1Q9NS23 344 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 FCF1Q9Y324 198 aaKnown RBP16.69■□□□□ 0.26
SCARB1-205ENST00000538291 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 A0A1W2PPM1 405 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SLC31A1O15431 190 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 CRHR1P34998 444 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 SLC26A3P40879 764 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 PNPLA8Q9NP80 782 aa16.69■□□□□ 0.26
SCARB1-205ENST00000538291 MTRF1O75570 445 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 SASH3O75995 380 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 HOXC12P31275 282 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 STXBP1P61764 594 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 LSM3P62310 102 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms