RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 DDOSTP39656 456 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SMARCB1Q12824 385 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 STX5Q13190 355 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 GPR50Q13585 617 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 DSG2Q14126 1118 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ZNF267Q14586 743 aaPredicted RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 TAF12Q16514 161 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SYT16Q17RD7 645 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 LRRC26Q2I0M4 334 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 FUT11Q495W5 492 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CCDC14Q49A88 953 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 LIPMQ5VYY2 423 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 TMEM65Q6PI78 240 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 KIAA1324Q6UXG2 1013 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 CYHR1Q6ZMK1 362 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 TMBIM1Q969X1 311 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 RNF145Q96MT1 663 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CPXM1Q96SM3 734 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ASNSD1Q9NWL6 643 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 TMPRSS11EQ9UL52 423 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 VPS4AQ9UN37 437 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SLITRK5O94991 958 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 AGR2O95994 175 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 CALB1P05937 261 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ALDOCP09972 364 aaKnown RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 CAPN3P20807 821 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PRKACGP22612 351 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ACVR2AP27037 513 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 NUDT1P36639 197 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 NPTX2P47972 431 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SERPINB10P48595 397 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PRKAA1Q13131 559 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SEMA5AQ13591 1074 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 INPP5AQ14642 412 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SMN1Q16637 294 aaKnown RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 ZACNQ401N2 412 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 STEAP4Q687X5 459 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 CLEC6AQ6EIG7 209 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 GLYATQ6IB77 296 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 NAPEPLDQ6IQ20 393 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PAMR1Q6UXH9 720 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 DPY19L3Q6ZPD9 716 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 WDR49Q8IV35 697 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 C8orf59Q8N0T1 100 aaPredicted RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 CLEC4FQ8N1N0 589 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 TTLQ8NG68 377 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 GRPEL2Q8TAA5 225 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SLC7A14Q8TBB6 771 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 DNAJB14Q8TBM8 379 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ASPSCR1Q9BZE9 553 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 HAPLN2Q9GZV7 340 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 C8orf4Q9NR00 106 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SLAMF8Q9P0V8 285 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 TEKT2Q9UIF3 430 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 WBP11Q9Y2W2 641 aaKnown RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 IRS2Q9Y4H2 1338 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 A0A0B4J293 547 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SAGE2PA6NJ88 616 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 KPNA7A9QM74 516 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 C19orf81C9J6K1 198 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 DSCR3O14972 297 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 UBDO15205 165 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 NOS1APO75052 506 aaPredicted RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 SOAT2O75908 522 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 CYBBP04839 570 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 LCKP06239 509 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 THRBP10828 461 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 GRK5P34947 590 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 MAGEA12P43365 314 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 RFX2P48378 723 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 BCAT1P54687 386 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 MAP3K7CLP57077 242 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 GABPAQ06546 454 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 COX10Q12887 443 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PLA2G4EQ3MJ16 856 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ZMAT1Q5H9K5 638 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ATF7IP2Q5U623 682 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PLD3Q8IV08 490 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 PCDH19Q8TAB3 1148 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 MCOLN3Q8TDD5 553 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 CLEC4DQ8WXI8 215 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 TTC9Q92623 222 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 RNF31Q96EP0 1072 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ZBTB45Q96K62 511 aaPredicted RBP10.61□□□□□ -0.71
RTN3-208ENST00000537981 C3orf30Q96M34 536 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 ACOX2Q99424 681 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 RBBP8Q99708 897 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 CYP4F12Q9HCS2 524 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 HPS4Q9NQG7 708 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 FAM118AQ9NWS6 357 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms